Pavir.Bb01710 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.Bb01710 T143320_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb01710.1.p C2H2 ZF 753 773

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB05056.1 Alternaria brassicicola AB05056.1 N
COCC4DRAFT_137441 Bipolaris maydis COCC4DRAFT_137441 N
COCMIDRAFT_94153 Bipolaris oryzae COCMIDRAFT_94153 N
COCVIDRAFT_95708 Bipolaris victoriae COCVIDRAFT_95708 N
COCCADRAFT_105405 Bipolaris zeicola COCCADRAFT_105405 N
PV07_04845 Cladophialophora immunda PV07_04845 I
e_gw1.9.820.1 Cochliobolus heterostrophus C5 e_gw1.9.820.1 N
DRE_02202 Drechslerella stenobrocha DRE_02202 I
A1O9_10610 Exophiala aquamarina A1O9_10610 N
HMPREF1120_08148 Exophiala dermatitidis HMPREF1120_08148 I
PV06_08981 Exophiala oligosperma PV06_08981 N
FFUJ_12055 Fusarium fujikuroi FFUJ_12055 N
NechaG102141 Fusarium solani NechaG102141 N
estExt_fgenesh1_pg.C_sca_29_chr12_4_00173 Nectria haematococca estExt_fgenesh1_pg.C_sca_29_chr12_4_00173 N
SNOG_13024 Phaeosphaeria nodorum SNOG_13024 N
PTRG_06548 Pyrenophora triticirepentis PTRG_06548 N
moc3 Schizosaccharomyces pombe SPAC821.07c I
SETTUDRAFT_160687 Setosphaeria turcica SETTUDRAFT_160687 N
SNOG_13024 Stagonospora nodorum SNOG_13024 N
VHEMI01402 Torrubiella hemipterigena VHEMI01402 N
TRIATDRAFT_45054 Trichoderma atroviride TRIATDRAFT_45054 N
TRIVIDRAFT_205900 Trichoderma virens TRIVIDRAFT_205900 N
TRIVIDRAFT_55531 Trichoderma virens TRIVIDRAFT_55531 I
VDBG_02399 Verticillium albo atrum VDBG_02399 I
VDBG_02399 Verticillium alfalfae VDBG_02399 I