CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh1_pg.C_sca_29_chr12_4_00173
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pg.C_sca_29_chr12_4_00173
T389652_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_sca_29_chr12_4_00173
Zinc cluster
15
52
TGCLTCRQRRKKCDEKSPVCGNCASVARECQWPSSKDM
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG102141
Fusarium solani
NechaG102141
N
0.683
COCC4DRAFT_137441
Bipolaris maydis
COCC4DRAFT_137441
N
0.547
COCCADRAFT_105405
Bipolaris zeicola
COCCADRAFT_105405
N
0.547
COCSADRAFT_324435
Bipolaris sorokiniana
COCSADRAFT_324435
N
0.547
COCVIDRAFT_95708
Bipolaris victoriae
COCVIDRAFT_95708
N
0.547
SETTUDRAFT_160687
Setosphaeria turcica
SETTUDRAFT_160687
N
0.547
Z517_04525
Fonsecaea pedrosoi
Z517_04525
I
0.547
e_gw1.9.820.1
Cochliobolus heterostrophus C5
e_gw1.9.820.1
N
0.547
CaO19.1227
Candida albicans
CaO19.1227
I
0.546
CaO19.8813
Candida albicans
CaO19.8813
I
0.546
COCMIDRAFT_94153
Bipolaris oryzae
COCMIDRAFT_94153
N
0.545
PV10_04412
Exophiala mesophila
PV10_04412
N
0.545
PV06_10524
Exophiala oligosperma
PV06_10524
N
0.537