znf740 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-1219010 T145391_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zfp740
M00784_2.00 		Mus musculus
MCCCCCCNHN
NDNGGGGGGK		 PBM
Weirauch et al.(2013)
pTH2857 		0.803 0.838
Zfp740
M00143_2.00 		Mus musculus
HMCCCCCNNN
NNNGGGGGKD		 PBM
Badis et al.(2009)
Zfp740_0925 		0.803 0.838
Zfp740
M02935_2.00 		Mus musculus
NCCCCCCCAH
DTGGGGGGGN		 SELEX
Jolma et al.(2013)
Zfp740_1 		0.803 0.838
ZNF740
M02891_2.00 		Homo sapiens
VCCCCCCCMY
RKGGGGGGGB		 SELEX
Jolma et al.(2013)
ZNF740_1 		0.787 0.824
ZNF740
M02892_2.00 		Homo sapiens
VCCCCCCCAY
RTGGGGGGGB		 SELEX
Jolma et al.(2013)
ZNF740_2 		0.787 0.824
ZNF740
M04467_2.00 		Homo sapiens
NYVCCCCCCCCAC
GTGGGGGGGGBRN		 SELEX
Yin et al.(2017)
ZNF740_eDBD_HT-SELEX 		0.787 0.824
ZNF740
M04469_2.00 		Homo sapiens
NYNCCCCCCCCAC
GTGGGGGGGGNRN		 SELEX
Yin et al.(2017)
ZNF740_FL_HT-SELEX 		0.787 0.824
ZNF740
M10221_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF740_02 		0.787 0.824
ZNF740
M04468_2.00 		Homo sapiens
YYDCCCCCCCCAY
RTGGGGGGGGHRR		 SELEX
Yin et al.(2017)
ZNF740_eDBD_Methyl-HT-SELEX 		0.787 0.824
ZNF740
M04470_2.00 		Homo sapiens
NYVCCCCCCCCAC
GTGGGGGGGGBRN		 SELEX
Yin et al.(2017)
ZNF740_FL_Methyl-HT-SELEX 		0.787 0.824
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH76952 C2H2 ZF 99 121
AAH76952 C2H2 ZF 127 149
AAH76952 C2H2 ZF 155 176
XP_002936682 C2H2 ZF 124 146
XP_002936682 C2H2 ZF 152 174
XP_002936682 C2H2 ZF 180 201

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004487 Ailuropoda melanoleuca ENSAMEG00000004487 I
Alligator_sinensis_CCG009324.2 Alligator sinensis Alligator_sinensis_CCG009324.2 I
ENSAPLG00000014705 Anas platyrhynchos ENSAPLG00000014705 I
STAT6 Anolis carolinensis ENSACAG00000009680 I
Afo_R009816 Aptenodytes forsteri Afo_R009816 I
STAT6 Bos taurus ENSBTAG00000006335 I
STAT6 Callithrix jacchus ENSCJAG00000010327 I
Aan_R000713 Calypte anna Aan_R000713 I
STAT6 Canis familiaris ENSCAFG00000000163 I
Cmyd_10002722 Chelonia mydas Cmyd_10002722 I
ENSCSAG00000004973 Chlorocebus sabaeus ENSCSAG00000004973 I
STAT6 Dasypus novemcinctus ENSDNOG00000033099 I
STAT6 Equus caballus ENSECAG00000008705 I
STAT6 Felis catus ENSFCAG00000014571 I
ENSFALG00000000376 Ficedula albicollis ENSFALG00000000376 I
ENSGALG00000025956 Gallus gallus ENSGALG00000025956 I
Gfo_R015302 Geospiza fortis Gfo_R015302 I
STAT6 Homo sapiens ENSG00000166888 D
ENSSTOG00000013280 Ictidomys tridecemlineatus ENSSTOG00000013280 I
STAT6 Loxodonta africana ENSLAFG00000005970 I
ENSMEUG00000016670 Macropus eugenii ENSMEUG00000016670 I
ENSMGAG00000006798 Meleagris gallopavo ENSMGAG00000006798 I
STAT6 Microcebus murinus ENSMICG00000009087 I
STAT6 Monodelphis domestica ENSMODG00000019411 I
ENSMPUG00000001746 Mustela putorius furo ENSMPUG00000001746 I
Stat6 Mus musculus ENSMUSG00000002147 D
Myotis_brandtii_STAT6_10018366 Myotis brandtii Myotis_brandtii_STAT6_10018366 I
STAT6 Myotis lucifugus ENSMLUG00000006689 I
ENSNLEG00000017396 Nomascus leucogenys ENSNLEG00000017396 I
STAT6 Ochotona princeps ENSOPRG00000013409 I
Ogr04374 Ophisaurus gracilis Ogr04374 I
STAT6 Oryctolagus cuniculus ENSOCUG00000007929 I
STAT6 Otolemur garnettii ENSOGAG00000005002 I
Pvit_05823 Pogona vitticeps Pvit_05823 N
ENSPPYG00000004680 Pongo abelii ENSPPYG00000004680 I
STAT6 Procavia capensis ENSPCAG00000009432 I
Stat6 Rattus norvegicus ENSRNOG00000025023 I
ENSSHAG00000006372 Sarcophilus harrisii ENSSHAG00000006372 I
ENSSSCG00000025960 Sus scrofa ENSSSCG00000025960 I
ENSSSCG00000026524 Sus scrofa ENSSSCG00000026524 I
STAT6 Tupaia belangeri ENSTBEG00000013664 I
STAT6 Tursiops truncatus ENSTTRG00000013064 I