HCOI00724700 (Haemonchus contortus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HCOI00724700 T153815_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lsy-2
M00615_2.00 		Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN		 PBM
Narasimhan et al.(2015)
pTH10810 		0.765 0.899
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI00724700.t1 C2H2 ZF 43 65
HCOI00724700.t1 C2H2 ZF 71 93
HCOI00724700.t1 C2H2 ZF 99 121
HCOI00724700.t2 C2H2 ZF 54 76
HCOI00724700.t2 C2H2 ZF 82 104
HCOI00724700.t2 C2H2 ZF 110 132
HCOI00724700.t3 C2H2 ZF 34 56
HCOI00724700.t3 C2H2 ZF 62 84
HCOI00724700.t3 C2H2 ZF 90 112

Links

Other C2H2 ZF family TFs
Other Haemonchus contortus TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CADANGAG00009949 Aspergillus niger CADANGAG00009949 N
EURHEDRAFT_506915 Aspergillus ruber EURHEDRAFT_506915 N
FFUJ_00041 Fusarium fujikuroi FFUJ_00041 N
FVEG_00011 Fusarium verticillioides FVEG_00011 N
OIDMADRAFT_207300 Oidiodendron maius OIDMADRAFT_207300 N
Pc21g17730 Penicillium chrysogenum Pc21g17730 N
PCH_Pc21g17730 Penicillium rubens PCH_Pc21g17730 N
U727_00432743621 Penicillium solitum U727_00432743621 N