HCOI00724700 (Haemonchus contortus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HCOI00724700 T153815_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lsy-2
M00615_2.00 		Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN		 PBM
Narasimhan et al.(2015)
pTH10810 		0.765 0.899
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI00724700.t1 C2H2 ZF 43 65
HCOI00724700.t1 C2H2 ZF 71 93
HCOI00724700.t1 C2H2 ZF 99 121
HCOI00724700.t2 C2H2 ZF 54 76
HCOI00724700.t2 C2H2 ZF 82 104
HCOI00724700.t2 C2H2 ZF 110 132
HCOI00724700.t3 C2H2 ZF 34 56
HCOI00724700.t3 C2H2 ZF 62 84
HCOI00724700.t3 C2H2 ZF 90 112

Links

Other C2H2 ZF family TFs
Other Haemonchus contortus TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0001110701 Angiostrongylus cantonensis ACAC_0001110701 I 0.827
ACOC_0000922301 Angiostrongylus costaricensis ACOC_0000922301 I 0.827
DICVIV_07054 Dictyocaulus viviparus DICVIV_07054 I 0.827
HCOI02146700 Haemonchus contortus HCOI02146700 I 0.827
HPBE_0002592101 Heligmosomoides bakeri HPBE_0002592101 I 0.827
HPLM_0001991801 Haemonchus placei HPLM_0001991801 I 0.827
NECAME_01009 Necator americanus NECAME_01009 I 0.827
SVUK_0001722901 Strongylus vulgaris SVUK_0001722901 I 0.827
TELCIR_11883 Teladorsagia circumcincta TELCIR_11883 I 0.827
scaffold451-EXSNAP2012.20 Pristionchus exspectatus scaffold451-EXSNAP2012.20 I 0.811
DME_0000351801 Dracunculus medinensis DME_0000351801 I 0.807
Bm4236 Brugia malayi Bm4236 I 0.795
LOAG_03108 Loa loa LOAG_03108 I 0.795
WBGene00238990 Onchocerca volvulus WBGene00238990 I 0.795
ASIM_0001293301 Anisakis simplex ASIM_0001293301 I 0.795
ASU_12247 Ascaris suum ASU_12247 I 0.795
EEL_0000737301 Elaeophora elaphi EEL_0000737301 I 0.795
L596_g16162 Steinernema carpocapsae L596_g16162 I 0.795
L889_g19596 Steinernema feltiae L889_g19596 I 0.795
L892_g2739 Steinernema scapterisci L892_g2739 I 0.795
L893_g11388 Steinernema glaseri L893_g11388 I 0.795
L898_g10136 Steinernema monticolum L898_g10136 I 0.795
nAv.1.0.1.g08633 Acanthocheilonema viteae nAv.1.0.1.g08633 I 0.795
nDi.2.2.2.g06219 Dirofilaria immitis nDi.2.2.2.g06219 I 0.795
nLs.2.1.2.g05842 Litomosoides sigmodontis nLs.2.1.2.g05842 I 0.795
nOo.2.0.1.g05859 Onchocerca ochengi nOo.2.0.1.g05859 I 0.795
OFLC_0001560101 Onchocerca flexuosa OFLC_0001560101 I 0.795
TCNE_0000759901 Toxocara canis TCNE_0000759901 I 0.795
L898_g24033 Steinernema monticolum L898_g24033 I 0.792
L898_g9710 Steinernema monticolum L898_g9710 I 0.789
EVEC_0000258101 Enterobius vermicularis EVEC_0000258101 I 0.787
SMUV_0000188601 Syphacia muris SMUV_0000188601 I 0.787
CBN06681 Caenorhabditis brenneri CBN06681 I 0.781
L893_g11389 Steinernema glaseri L893_g11389 I 0.779
RSKR_0000546900 Rhabditophanes kr3021 RSKR_0000546900 N 0.778
BXY_1109100 Bursaphelenchus xylophilus BXY_1109100 N 0.773
MhA1_Contig334.frz3.gene6 Meloidogyne hapla MhA1_Contig334.frz3.gene6 I 0.771
PTRK_0001062600 Parastrongyloides trichosuri PTRK_0001062600 I 0.771
SSTP_0001164000 Strongyloides stercoralis SSTP_0001164000 I 0.771
CJA18701 Caenorhabditis japonica CJA18701 I 0.769
RSKR_0000755800 Rhabditophanes kr3021 RSKR_0000755800 I 0.768
CBG14093 Caenorhabditis briggsae CBG14093 I 0.765
CRE00458 Caenorhabditis remanei CRE00458 I 0.765
lsy-2 Caenorhabditis elegans WBGene00003087 D 0.765
CBN25393 Caenorhabditis brenneri CBN25393 I 0.761
L596_g623 Steinernema carpocapsae L596_g623 I 0.757