CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L893_g11389
(
Steinernema glaseri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
L893_g11389
T154627_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
lsy-2
M00615_2.00
Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN
PBM
Narasimhan et al.(2015)
pTH10810
0.762
0.855
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L893_g11389.t1
C2H2 ZF
81
103
HQCNICEKIFVSFKGLQQHAVVH
L893_g11389.t1
C2H2 ZF
109
131
FGCEICGKSFRFKSNLFEHRSVH
L893_g11389.t1
C2H2 ZF
138
160
YVCPYCGKTCRLKGNLKKHIRTH
Links
Other
C2H2 ZF
family TFs
Other
Steinernema glaseri
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EEL_0000737301
Elaeophora elaphi
EEL_0000737301
I
0.795
L898_g10136
Steinernema monticolum
L898_g10136
I
0.795
nAv.1.0.1.g08633
Acanthocheilonema viteae
nAv.1.0.1.g08633
I
0.795
ASU_12247
Ascaris suum
ASU_12247
I
0.795
L893_g11388
Steinernema glaseri
L893_g11388
I
0.795
L892_g2739
Steinernema scapterisci
L892_g2739
I
0.795
L596_g16162
Steinernema carpocapsae
L596_g16162
I
0.795
Bm4236
Brugia malayi
Bm4236
I
0.795
L889_g19596
Steinernema feltiae
L889_g19596
I
0.795
ASIM_0001293301
Anisakis simplex
ASIM_0001293301
I
0.795
nDi.2.2.2.g06219
Dirofilaria immitis
nDi.2.2.2.g06219
I
0.795
OFLC_0001560101
Onchocerca flexuosa
OFLC_0001560101
I
0.795
TCNE_0000759901
Toxocara canis
TCNE_0000759901
I
0.795
nOo.2.0.1.g05859
Onchocerca ochengi
nOo.2.0.1.g05859
I
0.795
LOAG_03108
Loa loa
LOAG_03108
I
0.795
nLs.2.1.2.g05842
Litomosoides sigmodontis
nLs.2.1.2.g05842
I
0.795
WBGene00238990
Onchocerca volvulus
WBGene00238990
I
0.795
L898_g24033
Steinernema monticolum
L898_g24033
I
0.791
L898_g9710
Steinernema monticolum
L898_g9710
I
0.788
L596_g623
Steinernema carpocapsae
L596_g623
I
0.785
TELCIR_11883
Teladorsagia circumcincta
TELCIR_11883
I
0.779
NECAME_01009
Necator americanus
NECAME_01009
I
0.779
scaffold451-EXSNAP2012.20
Pristionchus exspectatus
scaffold451-EXSNAP2012.20
I
0.779
SVUK_0001722901
Strongylus vulgaris
SVUK_0001722901
I
0.779
HPLM_0001991801
Haemonchus placei
HPLM_0001991801
I
0.779
ACOC_0000922301
Angiostrongylus costaricensis
ACOC_0000922301
I
0.779
HPBE_0002592101
Heligmosomoides bakeri
HPBE_0002592101
I
0.779
DICVIV_07054
Dictyocaulus viviparus
DICVIV_07054
I
0.779
ACAC_0001110701
Angiostrongylus cantonensis
ACAC_0001110701
I
0.779
HCOI02146700
Haemonchus contortus
HCOI02146700
I
0.779
HCOI00724700
Haemonchus contortus
HCOI00724700
I
0.779
DME_0000351801
Dracunculus medinensis
DME_0000351801
I
0.775
CBN06681
Caenorhabditis brenneri
CBN06681
I
0.769
MhA1_Contig334.frz3.gene6
Meloidogyne hapla
MhA1_Contig334.frz3.gene6
I
0.767
CJA18701
Caenorhabditis japonica
CJA18701
I
0.766
RSKR_0000546900
Rhabditophanes kr3021
RSKR_0000546900
N
0.765
CRE00458
Caenorhabditis remanei
CRE00458
I
0.762
lsy-2
Caenorhabditis elegans
WBGene00003087
D
0.762
CBG14093
Caenorhabditis briggsae
CBG14093
I
0.762
EFV59471
Trichinella spiralis
EFV59471
N
0.760
D917_09259
Trichinella nativa
D917_09259
N
0.760
CBN25393
Caenorhabditis brenneri
CBN25393
I
0.758
TTRE_0000415001
Trichuris trichiura
TTRE_0000415001
N
0.756
TMUE_s0035003400
Trichuris muris
TMUE_s0035003400
N
0.756
D918_06537
Trichuris suis
D918_06537
N
0.756
L889_g8940
Steinernema feltiae
L889_g8940
N
0.756