CRE00458 (Caenorhabditis remanei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CRE00458 T084956_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lsy-2
M00615_2.00 		Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN		 PBM
Narasimhan et al.(2015)
pTH10810 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE00458 C2H2 ZF 71 93
CRE00458 C2H2 ZF 99 121
CRE00458 C2H2 ZF 127 149

Links

Other C2H2 ZF family TFs
Other Caenorhabditis remanei TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG14093 Caenorhabditis briggsae CBG14093 I 0.827
lsy-2 Caenorhabditis elegans WBGene00003087 D 0.827
CBN25393 Caenorhabditis brenneri CBN25393 I 0.823
CJA18701 Caenorhabditis japonica CJA18701 I 0.823
EVEC_0000258101 Enterobius vermicularis EVEC_0000258101 I 0.797
SMUV_0000188601 Syphacia muris SMUV_0000188601 I 0.797
L596_g623 Steinernema carpocapsae L596_g623 I 0.787
Bm4236 Brugia malayi Bm4236 I 0.781
LOAG_03108 Loa loa LOAG_03108 I 0.781
WBGene00238990 Onchocerca volvulus WBGene00238990 I 0.781
ASIM_0001293301 Anisakis simplex ASIM_0001293301 I 0.781
ASU_12247 Ascaris suum ASU_12247 I 0.781
EEL_0000737301 Elaeophora elaphi EEL_0000737301 I 0.781
L596_g16162 Steinernema carpocapsae L596_g16162 I 0.781
L889_g19596 Steinernema feltiae L889_g19596 I 0.781
L892_g2739 Steinernema scapterisci L892_g2739 I 0.781
L893_g11388 Steinernema glaseri L893_g11388 I 0.781
L898_g10136 Steinernema monticolum L898_g10136 I 0.781
nAv.1.0.1.g08633 Acanthocheilonema viteae nAv.1.0.1.g08633 I 0.781
nDi.2.2.2.g06219 Dirofilaria immitis nDi.2.2.2.g06219 I 0.781
nLs.2.1.2.g05842 Litomosoides sigmodontis nLs.2.1.2.g05842 I 0.781
nOo.2.0.1.g05859 Onchocerca ochengi nOo.2.0.1.g05859 I 0.781
OFLC_0001560101 Onchocerca flexuosa OFLC_0001560101 I 0.781
RSKR_0000755800 Rhabditophanes kr3021 RSKR_0000755800 I 0.781
scaffold451-EXSNAP2012.20 Pristionchus exspectatus scaffold451-EXSNAP2012.20 I 0.781
TCNE_0000759901 Toxocara canis TCNE_0000759901 I 0.781
L898_g24033 Steinernema monticolum L898_g24033 I 0.777
L898_g9710 Steinernema monticolum L898_g9710 I 0.774
PTRK_0001062600 Parastrongyloides trichosuri PTRK_0001062600 I 0.768
SSTP_0001164000 Strongyloides stercoralis SSTP_0001164000 I 0.768
CBG03853 Caenorhabditis briggsae CBG03853 I 0.767
ACAC_0001110701 Angiostrongylus cantonensis ACAC_0001110701 I 0.765
ACOC_0000922301 Angiostrongylus costaricensis ACOC_0000922301 I 0.765
DICVIV_07054 Dictyocaulus viviparus DICVIV_07054 I 0.765
HCOI00724700 Haemonchus contortus HCOI00724700 I 0.765
HCOI02146700 Haemonchus contortus HCOI02146700 I 0.765
HPBE_0002592101 Heligmosomoides bakeri HPBE_0002592101 I 0.765
HPLM_0001991801 Haemonchus placei HPLM_0001991801 I 0.765
NECAME_01009 Necator americanus NECAME_01009 I 0.765
SVUK_0001722901 Strongylus vulgaris SVUK_0001722901 I 0.765
TELCIR_11883 Teladorsagia circumcincta TELCIR_11883 I 0.765
L893_g11389 Steinernema glaseri L893_g11389 I 0.762
DME_0000351801 Dracunculus medinensis DME_0000351801 I 0.761
MhA1_Contig334.frz3.gene6 Meloidogyne hapla MhA1_Contig334.frz3.gene6 I 0.761
CRE08255 Caenorhabditis remanei CRE08255 I 0.760
RSKR_0000546600 Rhabditophanes kr3021 RSKR_0000546600 I 0.758
SBAD_0000635801 Soboliphyme baturini SBAD_0000635801 I 0.757
CBN06681 Caenorhabditis brenneri CBN06681 I 0.756