RSKR_0000546600 (Rhabditophanes kr3021)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 RSKR_0000546600 T155895_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lsy-2
M00615_2.00 		Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN		 PBM
Narasimhan et al.(2015)
pTH10810 		0.758 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000546600.1 C2H2 ZF 38 60
RSKR_0000546600.1 C2H2 ZF 66 88
RSKR_0000546600.1 C2H2 ZF 94 116

Links

Other C2H2 ZF family TFs
Other Rhabditophanes kr3021 TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RSKR_0000755800 Rhabditophanes kr3021 RSKR_0000755800 I 0.785
PTRK_0001062600 Parastrongyloides trichosuri PTRK_0001062600 I 0.765
SSTP_0001164000 Strongyloides stercoralis SSTP_0001164000 I 0.765
EVEC_0000258101 Enterobius vermicularis EVEC_0000258101 I 0.761
SMUV_0000188601 Syphacia muris SMUV_0000188601 I 0.761
CBG14093 Caenorhabditis briggsae CBG14093 I 0.758
CJA18701 Caenorhabditis japonica CJA18701 I 0.758
CRE00458 Caenorhabditis remanei CRE00458 I 0.758
lsy-2 Caenorhabditis elegans WBGene00003087 D 0.758