SMUV_0000188601 (Syphacia muris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SMUV_0000188601 T156419_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lsy-2
M00615_2.00 		Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN		 PBM
Narasimhan et al.(2015)
pTH10810 		0.797 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000188601-mRNA-1 C2H2 ZF 65 87
SMUV_0000188601-mRNA-1 C2H2 ZF 93 115
SMUV_0000188601-mRNA-1 C2H2 ZF 121 143

Links

Other C2H2 ZF family TFs
Other Syphacia muris TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EVEC_0000258101 Enterobius vermicularis EVEC_0000258101 I 0.827
scaffold451-EXSNAP2012.20 Pristionchus exspectatus scaffold451-EXSNAP2012.20 I 0.803
CBN25393 Caenorhabditis brenneri CBN25393 I 0.801
CJA18701 Caenorhabditis japonica CJA18701 I 0.801
lsy-2 Caenorhabditis elegans WBGene00003087 D 0.797
CBG14093 Caenorhabditis briggsae CBG14093 I 0.797
CRE00458 Caenorhabditis remanei CRE00458 I 0.797
L898_g10136 Steinernema monticolum L898_g10136 I 0.787
nAv.1.0.1.g08633 Acanthocheilonema viteae nAv.1.0.1.g08633 I 0.787
L892_g2739 Steinernema scapterisci L892_g2739 I 0.787
L889_g19596 Steinernema feltiae L889_g19596 I 0.787
nDi.2.2.2.g06219 Dirofilaria immitis nDi.2.2.2.g06219 I 0.787
L893_g11388 Steinernema glaseri L893_g11388 I 0.787
OFLC_0001560101 Onchocerca flexuosa OFLC_0001560101 I 0.787
TCNE_0000759901 Toxocara canis TCNE_0000759901 I 0.787
TELCIR_11883 Teladorsagia circumcincta TELCIR_11883 I 0.787
SVUK_0001722901 Strongylus vulgaris SVUK_0001722901 I 0.787
Bm4236 Brugia malayi Bm4236 I 0.787
nLs.2.1.2.g05842 Litomosoides sigmodontis nLs.2.1.2.g05842 I 0.787
nOo.2.0.1.g05859 Onchocerca ochengi nOo.2.0.1.g05859 I 0.787
NECAME_01009 Necator americanus NECAME_01009 I 0.787
L596_g16162 Steinernema carpocapsae L596_g16162 I 0.787
ASIM_0001293301 Anisakis simplex ASIM_0001293301 I 0.787
DICVIV_07054 Dictyocaulus viviparus DICVIV_07054 I 0.787
ACOC_0000922301 Angiostrongylus costaricensis ACOC_0000922301 I 0.787
ACAC_0001110701 Angiostrongylus cantonensis ACAC_0001110701 I 0.787
LOAG_03108 Loa loa LOAG_03108 I 0.787
WBGene00238990 Onchocerca volvulus WBGene00238990 I 0.787
EEL_0000737301 Elaeophora elaphi EEL_0000737301 I 0.787
ASU_12247 Ascaris suum ASU_12247 I 0.787
HPBE_0002592101 Heligmosomoides bakeri HPBE_0002592101 I 0.787
HCOI02146700 Haemonchus contortus HCOI02146700 I 0.787
HPLM_0001991801 Haemonchus placei HPLM_0001991801 I 0.787
HCOI00724700 Haemonchus contortus HCOI00724700 I 0.787
RSKR_0000755800 Rhabditophanes kr3021 RSKR_0000755800 I 0.784
L898_g24033 Steinernema monticolum L898_g24033 I 0.784
L596_g623 Steinernema carpocapsae L596_g623 I 0.781
L898_g9710 Steinernema monticolum L898_g9710 I 0.781
DME_0000351801 Dracunculus medinensis DME_0000351801 I 0.775
SSTP_0001164000 Strongyloides stercoralis SSTP_0001164000 I 0.771
PTRK_0001062600 Parastrongyloides trichosuri PTRK_0001062600 I 0.771
SBAD_0000635801 Soboliphyme baturini SBAD_0000635801 I 0.764
RSKR_0000546600 Rhabditophanes kr3021 RSKR_0000546600 I 0.761
CBG03853 Caenorhabditis briggsae CBG03853 I 0.760