scaffold451-EXSNAP2012.20 (Pristionchus exspectatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 scaffold451-EXSNAP2012.20 T156091_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lsy-2
M00615_2.00 		Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN		 PBM
Narasimhan et al.(2015)
pTH10810 		0.781 0.942
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold451-EXSNAP2012.20 C2H2 ZF 66 88
scaffold451-EXSNAP2012.20 C2H2 ZF 94 116
scaffold451-EXSNAP2012.20 C2H2 ZF 122 144

Links

Other C2H2 ZF family TFs
Other Pristionchus exspectatus TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bm4236 Brugia malayi Bm4236 I 0.811
LOAG_03108 Loa loa LOAG_03108 I 0.811
WBGene00238990 Onchocerca volvulus WBGene00238990 I 0.811
ACAC_0001110701 Angiostrongylus cantonensis ACAC_0001110701 I 0.811
ACOC_0000922301 Angiostrongylus costaricensis ACOC_0000922301 I 0.811
ASIM_0001293301 Anisakis simplex ASIM_0001293301 I 0.811
ASU_12247 Ascaris suum ASU_12247 I 0.811
DICVIV_07054 Dictyocaulus viviparus DICVIV_07054 I 0.811
EEL_0000737301 Elaeophora elaphi EEL_0000737301 I 0.811
HCOI00724700 Haemonchus contortus HCOI00724700 I 0.811
HCOI02146700 Haemonchus contortus HCOI02146700 I 0.811
HPBE_0002592101 Heligmosomoides bakeri HPBE_0002592101 I 0.811
HPLM_0001991801 Haemonchus placei HPLM_0001991801 I 0.811
L596_g16162 Steinernema carpocapsae L596_g16162 I 0.811
L889_g19596 Steinernema feltiae L889_g19596 I 0.811
L892_g2739 Steinernema scapterisci L892_g2739 I 0.811
L893_g11388 Steinernema glaseri L893_g11388 I 0.811
L898_g10136 Steinernema monticolum L898_g10136 I 0.811
nAv.1.0.1.g08633 Acanthocheilonema viteae nAv.1.0.1.g08633 I 0.811
nDi.2.2.2.g06219 Dirofilaria immitis nDi.2.2.2.g06219 I 0.811
NECAME_01009 Necator americanus NECAME_01009 I 0.811
nLs.2.1.2.g05842 Litomosoides sigmodontis nLs.2.1.2.g05842 I 0.811
nOo.2.0.1.g05859 Onchocerca ochengi nOo.2.0.1.g05859 I 0.811
OFLC_0001560101 Onchocerca flexuosa OFLC_0001560101 I 0.811
SVUK_0001722901 Strongylus vulgaris SVUK_0001722901 I 0.811
TCNE_0000759901 Toxocara canis TCNE_0000759901 I 0.811
TELCIR_11883 Teladorsagia circumcincta TELCIR_11883 I 0.811
L898_g24033 Steinernema monticolum L898_g24033 I 0.808
L898_g9710 Steinernema monticolum L898_g9710 I 0.805
EVEC_0000258101 Enterobius vermicularis EVEC_0000258101 I 0.803
SMUV_0000188601 Syphacia muris SMUV_0000188601 I 0.803
DME_0000351801 Dracunculus medinensis DME_0000351801 I 0.791
CJA18701 Caenorhabditis japonica CJA18701 I 0.785
CBG14093 Caenorhabditis briggsae CBG14093 I 0.781
CRE00458 Caenorhabditis remanei CRE00458 I 0.781
lsy-2 Caenorhabditis elegans WBGene00003087 D 0.781
L893_g11389 Steinernema glaseri L893_g11389 I 0.779
RSKR_0000546900 Rhabditophanes kr3021 RSKR_0000546900 N 0.778
CBN25393 Caenorhabditis brenneri CBN25393 I 0.777
MhA1_Contig334.frz3.gene6 Meloidogyne hapla MhA1_Contig334.frz3.gene6 I 0.771
RSKR_0000755800 Rhabditophanes kr3021 RSKR_0000755800 I 0.768
SBAD_0000635801 Soboliphyme baturini SBAD_0000635801 I 0.768
CBN06681 Caenorhabditis brenneri CBN06681 I 0.765
BXY_1109100 Bursaphelenchus xylophilus BXY_1109100 N 0.757
L596_g623 Steinernema carpocapsae L596_g623 I 0.757