CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN06681
(
Caenorhabditis brenneri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CBN06681
T082996_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
lsy-2
M00615_2.00
Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN
PBM
Narasimhan et al.(2015)
pTH10810
0.756
0.725
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN06681
C2H2 ZF
48
70
HQCHVCHKFFTNFKGLQQHLIIH
CBN06681
C2H2 ZF
76
98
FKCEVCGQTFRFKSNLFEHASVH
CBN06681
C2H2 ZF
104
126
YSCPYCQKMCRLKGNLKKHLRTH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis brenneri
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RSKR_0000546900
Rhabditophanes kr3021
RSKR_0000546900
N
0.791
DME_0000351801
Dracunculus medinensis
DME_0000351801
I
0.785
DICVIV_07054
Dictyocaulus viviparus
DICVIV_07054
I
0.781
HCOI00724700
Haemonchus contortus
HCOI00724700
I
0.781
HPBE_0002592101
Heligmosomoides bakeri
HPBE_0002592101
I
0.781
NECAME_01009
Necator americanus
NECAME_01009
I
0.781
ACOC_0000922301
Angiostrongylus costaricensis
ACOC_0000922301
I
0.781
HCOI02146700
Haemonchus contortus
HCOI02146700
I
0.781
HPLM_0001991801
Haemonchus placei
HPLM_0001991801
I
0.781
TELCIR_11883
Teladorsagia circumcincta
TELCIR_11883
I
0.781
ACAC_0001110701
Angiostrongylus cantonensis
ACAC_0001110701
I
0.781
SVUK_0001722901
Strongylus vulgaris
SVUK_0001722901
I
0.781
MhA1_Contig334.frz3.gene6
Meloidogyne hapla
MhA1_Contig334.frz3.gene6
I
0.779
L893_g11389
Steinernema glaseri
L893_g11389
I
0.769
BXY_1109100
Bursaphelenchus xylophilus
BXY_1109100
N
0.768
L898_g24033
Steinernema monticolum
L898_g24033
I
0.765
L898_g10136
Steinernema monticolum
L898_g10136
I
0.765
nAv.1.0.1.g08633
Acanthocheilonema viteae
nAv.1.0.1.g08633
I
0.765
nLs.2.1.2.g05842
Litomosoides sigmodontis
nLs.2.1.2.g05842
I
0.765
scaffold451-EXSNAP2012.20
Pristionchus exspectatus
scaffold451-EXSNAP2012.20
I
0.765
OFLC_0001560101
Onchocerca flexuosa
OFLC_0001560101
I
0.765
nOo.2.0.1.g05859
Onchocerca ochengi
nOo.2.0.1.g05859
I
0.765
nDi.2.2.2.g06219
Dirofilaria immitis
nDi.2.2.2.g06219
I
0.765
L892_g2739
Steinernema scapterisci
L892_g2739
I
0.765
TCNE_0000759901
Toxocara canis
TCNE_0000759901
I
0.765
LOAG_03108
Loa loa
LOAG_03108
I
0.765
EEL_0000737301
Elaeophora elaphi
EEL_0000737301
I
0.765
WBGene00238990
Onchocerca volvulus
WBGene00238990
I
0.765
L893_g11388
Steinernema glaseri
L893_g11388
I
0.765
L596_g16162
Steinernema carpocapsae
L596_g16162
I
0.765
ASIM_0001293301
Anisakis simplex
ASIM_0001293301
I
0.765
L889_g19596
Steinernema feltiae
L889_g19596
I
0.765
Bm4236
Brugia malayi
Bm4236
I
0.765
ASU_12247
Ascaris suum
ASU_12247
I
0.765
CBN25393
Caenorhabditis brenneri
CBN25393
I
0.760
L898_g9710
Steinernema monticolum
L898_g9710
I
0.759
scaffold825-EXSNAP2012.3
Pristionchus exspectatus
scaffold825-EXSNAP2012.3
N
0.756
L596_g623
Steinernema carpocapsae
L596_g623
I
0.756
CBG14093
Caenorhabditis briggsae
CBG14093
I
0.756
CRE00458
Caenorhabditis remanei
CRE00458
I
0.756
lsy-2
Caenorhabditis elegans
WBGene00003087
D
0.756