HPLM_0001789201 (Haemonchus placei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HPLM_0001789201 T154291_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
blmp-1
M08103_2.00 		Caenorhabditis elegans
YTYTCHYTTTY
RAAARDGARAR		 ChIP-seq
Mathelier et al.(2014)
MA0537.1 		0.797 0.904
blmp-1
M08195_2.00 		Caenorhabditis elegans
VACTTTCDCY
RGHGAAAGTB		 ChIP-seq
Contrino et al.(2012)
Mw137 		0.797 0.904
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPLM_0001789201-mRNA-1 C2H2 ZF 557 579
HPLM_0001789201-mRNA-1 C2H2 ZF 585 607
HPLM_0001789201-mRNA-1 C2H2 ZF 613 635
HPLM_0001789201-mRNA-1 C2H2 ZF 641 663
HPLM_0001789201-mRNA-1 C2H2 ZF 669 690

Links

Other C2H2 ZF family TFs
Other Haemonchus placei TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action