L893_g30492 (Steinernema glaseri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 L893_g30492 T154684_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu-2
M00645_2.00 		Caenorhabditis elegans
NNCCCMCKYN
NRMGKGGGNN		 PBM
Narasimhan et al.(2015)
pTH9354 		0.764 0.812
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L893_g30492.t1 C2H2 ZF 316 338
L893_g30492.t1 C2H2 ZF 344 366
L893_g30492.t1 C2H2 ZF 372 395
L893_g30492.t2 C2H2 ZF 270 292
L893_g30492.t2 C2H2 ZF 298 320
L893_g30492.t2 C2H2 ZF 326 349
L893_g30492.t3 C2H2 ZF 360 382
L893_g30492.t3 C2H2 ZF 388 410
L893_g30492.t3 C2H2 ZF 416 439

Links

Other C2H2 ZF family TFs
Other Steinernema glaseri TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GG20146 Drosophila erecta FBgn0112340 N
GH18836 Drosophila grimshawi FBgn0126303 N
Fer2 Drosophila melanogaster FBgn0038402 D
GI10095 Drosophila mojavensis FBgn0132861 N
GL12402 Drosophila persimilis FBgn0150009 N
GA19254 Drosophila pseudoobscura FBgn0079251 N
GM25729 Drosophila sechellia FBgn0180585 N
GD20306 Drosophila simulans FBgn0191781 N
GJ23831 Drosophila virilis FBgn0210927 N
GK14012 Drosophila willistoni FBgn0216018 N
GE26333 Drosophila yakuba FBgn0243363 N
LCUP009812 Lucilia cuprina LCUP009812 N
MDOA001038 Musca domestica MDOA001038 N
MDOA004999 Musca domestica MDOA004999 N