CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig2408.frz3.gene5
(
Meloidogyne hapla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
MhA1_Contig2408.frz3.gene5
T154975_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig2408.frz3.gene5
C2H2 ZF
5
29
FPCKHPDCPKVFANSSDRKKHQHVH
MhA1_Contig2408.frz3.gene5
C2H2 ZF
35
60
YRCDQDGCDKKYTHPSSLRKHLRAVH
Links
Other
C2H2 ZF
family TFs
Other
Meloidogyne hapla
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M437DRAFT_11369
Aureobasidium melanogenum
M437DRAFT_11369
N
0.000
PDIP_62560
Penicillium digitatum
PDIP_62560
N
0.000
POSPLDRAFT_97332
Postia placenta
POSPLDRAFT_97332
N
0.000
POSPLDRAFT_99103
Postia placenta
POSPLDRAFT_99103
N
0.000
V499_06624
Pseudogymnoascus pannorum
V499_06624
N
0.000
TRIVIDRAFT_47711
Trichoderma virens
TRIVIDRAFT_47711
N
0.000