CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig2408.frz3.gene5
(
Meloidogyne hapla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
MhA1_Contig2408.frz3.gene5
T154975_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig2408.frz3.gene5
C2H2 ZF
5
29
FPCKHPDCPKVFANSSDRKKHQHVH
MhA1_Contig2408.frz3.gene5
C2H2 ZF
35
60
YRCDQDGCDKKYTHPSSLRKHLRAVH
Links
Other
C2H2 ZF
family TFs
Other
Meloidogyne hapla
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
snap_masked-nMf.1.1.scaf00901-processed-gene-0.5
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf00901-processed-gene-0.5
N
0.818
GPLIN_000910900
Globodera pallida
GPLIN_000910900
N
0.782
ANCCAN_13802
Ancylostoma caninum
ANCCAN_13802
N
0.777
TELCIR_23243
Teladorsagia circumcincta
TELCIR_23243
N
0.777
ANCDUO_07508
Ancylostoma duodenale
ANCDUO_07508
N
0.767
MCOS_0000726801
Mesocestoides corti
MCOS_0000726801
N
0.767
SSLN_0000489501
Schistocephalus solidus
SSLN_0000489501
N
0.762