CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NBR_0001911301
(
Nippostrongylus brasiliensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NBR_0001911301
T155108_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0001911301-mRNA-1
C2H2 ZF
356
378
QCPFCDKRFRNEVSLKKHFVKKH
NBR_0001911301-mRNA-1
C2H2 ZF
385
403
VQCLDCFKCLPDKSHLSNH
NBR_0001911301-mRNA-1
C2H2 ZF
441
464
FKCNECNQKFLTPRKLRKHKKMSH
NBR_0001911301-mRNA-1
C2H2 ZF
470
492
YACHFCEELFTSEVSVMTHERIH
NBR_0001911301-mRNA-1
C2H2 ZF
498
521
FECKICDFRCNRYIQMENHKKEDH
NBR_0001911301-mRNA-1
C2H2 ZF
523
546
YLCSICQESYGEWAEIKNHTLSKH
Links
Other
C2H2 ZF
family TFs
Other
Nippostrongylus brasiliensis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_26646
Ancylostoma caninum
ANCCAN_26646
N
0.771
ANCCEY_03506
Ancylostoma ceylanicum
ANCCEY_03506
N
0.771
ANCDUO_05249
Ancylostoma duodenale
ANCDUO_05249
N
0.771
ACAC_0000942901
Angiostrongylus cantonensis
ACAC_0000942901
N
0.785
ACOC_0000498301
Angiostrongylus costaricensis
ACOC_0000498301
N
0.782
HCOI02104000
Haemonchus contortus
HCOI02104000
N
0.786
HPLM_0001313801
Haemonchus placei
HPLM_0001313801
N
0.786
HPBE_0000602801
Heligmosomoides bakeri
HPBE_0000602801
N
0.783
NECAME_16964
Necator americanus
NECAME_16964
N
0.767
TELCIR_17891
Teladorsagia circumcincta
TELCIR_17891
N
0.785