CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PTRK_0000085000
(
Parastrongyloides trichosuri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PTRK_0000085000
T155713_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRK_0000085000.1
C2H2 ZF
296
318
YICEYCNKDFRRPDILSRHLRRH
PTRK_0000085000.1
C2H2 ZF
324
346
FGCNDCGRFFSRSDHLRTHRRTH
PTRK_0000085000.1
C2H2 ZF
352
375
YKCPICNYAARRRDVLSRHLGARH
Links
Other
C2H2 ZF
family TFs
Other
Parastrongyloides trichosuri
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPLIN_000062600
Globodera pallida
GPLIN_000062600
N
0.769
GPLIN_001154300
Globodera pallida
GPLIN_001154300
N
0.769
L596_g11489
Steinernema carpocapsae
L596_g11489
I
0.771
L893_g30492
Steinernema glaseri
L893_g30492
I
0.767
SSTP_0000460600
Strongyloides stercoralis
SSTP_0000460600
N
0.827
SVE_1868800
Strongyloides venezuelensis
SVE_1868800
N
0.827