RSKR_0000656700 (Rhabditophanes kr3021)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 RSKR_0000656700 T155899_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.787 0.837
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.787 0.837
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.787 0.837
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000656700.1 C2H2 ZF 209 231
RSKR_0000656700.1 C2H2 ZF 237 259
RSKR_0000656700.1 C2H2 ZF 265 287
RSKR_0000656700.1 C2H2 ZF 293 316

Links

Other C2H2 ZF family TFs
Other Rhabditophanes kr3021 TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000019654 Ailuropoda melanoleuca ENSAMEG00000019654 I
ENSBTAP00000004465-D1 Bos grunniens ENSBTAP00000004465-D1 I
ZBTB43 Callithrix jacchus ENSCJAG00000017939 I
Aan_R008070 Calypte anna Aan_R008070 I
ENSCSAG00000019711 Chlorocebus sabaeus ENSCSAG00000019711 I
ZBTB43 Dasypus novemcinctus ENSDNOG00000032194 I
ENSDORG00000001810 Dipodomys ordii ENSDORG00000001810 I
ZBTB43 Echinops telfairi ENSETEG00000000019 I
ZBTB43 Equus caballus ENSECAG00000013239 I
ZBTB43 Erinaceus europaeus ENSEEUG00000009258 I
ZBTB43 Felis catus ENSFCAG00000031874 I
ZBTB43 Gorilla gorilla ENSGGOG00000017180 I
ZBTB43 Homo sapiens ENSG00000169155 D
ENSSTOG00000007435 Ictidomys tridecemlineatus ENSSTOG00000007435 I
ZBTB43 Loxodonta africana ENSLAFG00000011314 I
ENSP00000362556 Macaca fascicularis ENSP00000362556 I
ZBTB43 Macaca mulatta ENSMMUG00000013640 I
ENSMPUG00000019227 Mustela putorius furo ENSMPUG00000019227 I
Zbtb43 Mus musculus ENSMUSG00000026788 I
ZBTB43 Myotis lucifugus ENSMLUG00000010893 I
ENSNLEG00000017415 Nomascus leucogenys ENSNLEG00000017415 I
ZBTB43 Ochotona princeps ENSOPRG00000011453 I
ZBTB43 Oryctolagus cuniculus ENSOCUG00000009799 I
ZBTB43 Otolemur garnettii ENSOGAG00000002029 I
ENSOARG00000012600 Ovis aries ENSOARG00000012600 I
ZBTB43 Pan troglodytes ENSPTRG00000021378 I
ENSPANG00000000295 Papio anubis ENSPANG00000000295 I
ENSPPYG00000019615 Pongo abelii ENSPPYG00000019615 I
ZBTB43 Procavia capensis ENSPCAG00000006897 I
ZBTB43 Pteropus vampyrus ENSPVAG00000017706 I
Zbtb43 Rattus norvegicus ENSRNOG00000017017 I
ZBTB43 Sorex araneus ENSSARG00000013849 I
ENSSSCG00000029288 Sus scrofa ENSSSCG00000029288 I
ZBTB43 Tursiops truncatus ENSTTRG00000009614 I