CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RSKR_0000680500
(
Rhabditophanes kr3021
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
RSKR_0000680500
T155902_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mnm-2
M00616_2.00
Caenorhabditis elegans
RCNBWTCNNN
NNNGAWVNGY
PBM
Narasimhan et al.(2015)
pTH9080
0.804
0.928
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RSKR_0000680500.1
C2H2 ZF
219
241
YRCDVCDKTFSRSNTLITHKRIH
RSKR_0000680500.1
C2H2 ZF
247
269
FCCEHCGRAFRQPGNLTRHRLTH
RSKR_0000680500.1
C2H2 ZF
275
297
FVCSECNKAFNRASNLHTHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Rhabditophanes kr3021
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG001717.1
Alligator sinensis
Alligator_sinensis_CCG001717.1
N
ENSAPLG00000006423
Anas platyrhynchos
ENSAPLG00000006423
N
ENSACAG00000012706
Anolis carolinensis
ENSACAG00000012706
N
ENSFALG00000013162
Ficedula albicollis
ENSFALG00000013162
N
ENSGALG00000020878
Gallus gallus
ENSGALG00000020878
N
ENSMEUG00000015795
Macropus eugenii
ENSMEUG00000015795
N
ZFP64
Monodelphis domestica
ENSMODG00000016390
N
ZFP64
Ornithorhynchus anatinus
ENSOANG00000003137
N
ENSPSIG00000008007
Pelodiscus sinensis
ENSPSIG00000008007
N
Pvit_03346
Pogona vitticeps
Pvit_03346
N
ZFP64
Taeniopygia guttata
ENSTGUG00000008553
N