CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RSKR_0000680500
(
Rhabditophanes kr3021
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
RSKR_0000680500
T155902_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mnm-2
M00616_2.00
Caenorhabditis elegans
RCNBWTCNNN
NNNGAWVNGY
PBM
Narasimhan et al.(2015)
pTH9080
0.804
0.928
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RSKR_0000680500.1
C2H2 ZF
219
241
YRCDVCDKTFSRSNTLITHKRIH
RSKR_0000680500.1
C2H2 ZF
247
269
FCCEHCGRAFRQPGNLTRHRLTH
RSKR_0000680500.1
C2H2 ZF
275
297
FVCSECNKAFNRASNLHTHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Rhabditophanes kr3021
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action