RSKR_0000680500 (Rhabditophanes kr3021)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 RSKR_0000680500 T155902_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mnm-2
M00616_2.00 		Caenorhabditis elegans
RCNBWTCNNN
NNNGAWVNGY		 PBM
Narasimhan et al.(2015)
pTH9080 		0.804 0.928
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000680500.1 C2H2 ZF 219 241
RSKR_0000680500.1 C2H2 ZF 247 269
RSKR_0000680500.1 C2H2 ZF 275 297

Links

Other C2H2 ZF family TFs
Other Rhabditophanes kr3021 TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG001717.1 Alligator sinensis Alligator_sinensis_CCG001717.1 N
ENSAPLG00000006423 Anas platyrhynchos ENSAPLG00000006423 N
ENSACAG00000012706 Anolis carolinensis ENSACAG00000012706 N
ENSFALG00000013162 Ficedula albicollis ENSFALG00000013162 N
ENSGALG00000020878 Gallus gallus ENSGALG00000020878 N
ENSMEUG00000015795 Macropus eugenii ENSMEUG00000015795 N
ZFP64 Monodelphis domestica ENSMODG00000016390 N
ZFP64 Ornithorhynchus anatinus ENSOANG00000003137 N
ENSPSIG00000008007 Pelodiscus sinensis ENSPSIG00000008007 N
Pvit_03346 Pogona vitticeps Pvit_03346 N
ZFP64 Taeniopygia guttata ENSTGUG00000008553 N