RSKR_0000680500 (Rhabditophanes kr3021)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 RSKR_0000680500 T155902_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mnm-2
M00616_2.00 		Caenorhabditis elegans
RCNBWTCNNN
NNNGAWVNGY		 PBM
Narasimhan et al.(2015)
pTH9080 		0.804 0.928
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000680500.1 C2H2 ZF 219 241
RSKR_0000680500.1 C2H2 ZF 247 269
RSKR_0000680500.1 C2H2 ZF 275 297

Links

Other C2H2 ZF family TFs
Other Rhabditophanes kr3021 TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG16689 Caenorhabditis briggsae CBG16689 I 0.804
CBN21670 Caenorhabditis brenneri CBN21670 I 0.804
CJA18173 Caenorhabditis japonica CJA18173 I 0.804
CRE00068 Caenorhabditis remanei CRE00068 I 0.804
mnm-2 Caenorhabditis elegans WBGene00003380 D 0.804
ANCCEY_06081 Ancylostoma ceylanicum ANCCEY_06081 I 0.804
ACAC_0001268601 Angiostrongylus cantonensis ACAC_0001268601 I 0.800
ACOC_0000685901 Angiostrongylus costaricensis ACOC_0000685901 I 0.800
DICVIV_12463 Dictyocaulus viviparus DICVIV_12463 I 0.800
HPBE_0001596301 Heligmosomoides bakeri HPBE_0001596301 I 0.800
HCOI00972500 Haemonchus contortus HCOI00972500 I 0.794
ASU_05270 Ascaris suum ASU_05270 I 0.793
NBR_0000581401 Nippostrongylus brasiliensis NBR_0000581401 I 0.787
EVEC_0000906601 Enterobius vermicularis EVEC_0000906601 I 0.784
DME_0000476501 Dracunculus medinensis DME_0000476501 I 0.783
Bm2124 Brugia malayi Bm2124 I 0.771
WBGene00238816 Onchocerca volvulus WBGene00238816 I 0.771
nDi.2.2.2.g05062 Dirofilaria immitis nDi.2.2.2.g05062 I 0.771
LOAG_05928 Loa loa LOAG_05928 I 0.767