HPBE_0001596301 (Heligmosomoides bakeri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HPBE_0001596301 T154215_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mnm-2
M00616_2.00 		Caenorhabditis elegans
RCNBWTCNNN
NNNGAWVNGY		 PBM
Narasimhan et al.(2015)
pTH9080 		0.816 0.942
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0001596301-mRNA-1 C2H2 ZF 87 109
HPBE_0001596301-mRNA-1 C2H2 ZF 115 137
HPBE_0001596301-mRNA-1 C2H2 ZF 143 165

Links

Other C2H2 ZF family TFs
Other Heligmosomoides bakeri TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0001268601 Angiostrongylus cantonensis ACAC_0001268601 I 0.824
ACOC_0000685901 Angiostrongylus costaricensis ACOC_0000685901 I 0.824
ANCCEY_06081 Ancylostoma ceylanicum ANCCEY_06081 I 0.824
DICVIV_12463 Dictyocaulus viviparus DICVIV_12463 I 0.824
CBG16689 Caenorhabditis briggsae CBG16689 I 0.816
CBN21670 Caenorhabditis brenneri CBN21670 I 0.816
CJA18173 Caenorhabditis japonica CJA18173 I 0.816
CRE00068 Caenorhabditis remanei CRE00068 I 0.816
mnm-2 Caenorhabditis elegans WBGene00003380 D 0.816
NBR_0000581401 Nippostrongylus brasiliensis NBR_0000581401 I 0.814
HCOI00972500 Haemonchus contortus HCOI00972500 I 0.801
RSKR_0000680500 Rhabditophanes kr3021 RSKR_0000680500 I 0.800
ASU_05270 Ascaris suum ASU_05270 I 0.793
DME_0000476501 Dracunculus medinensis DME_0000476501 I 0.787
EVEC_0000906601 Enterobius vermicularis EVEC_0000906601 I 0.784
Bm2124 Brugia malayi Bm2124 I 0.771
WBGene00238816 Onchocerca volvulus WBGene00238816 I 0.771
nDi.2.2.2.g05062 Dirofilaria immitis nDi.2.2.2.g05062 I 0.771
LOAG_05928 Loa loa LOAG_05928 I 0.767
LotgiG58234 Lottia gigantea LotgiG58234 I 0.760
LotgiG69875 Lottia gigantea LotgiG69875 I 0.757