scaffold451-EXSNAP2012.20 (Pristionchus exspectatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 scaffold451-EXSNAP2012.20 T156091_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lsy-2
M00615_2.00 		Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN		 PBM
Narasimhan et al.(2015)
pTH10810 		0.781 0.942
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold451-EXSNAP2012.20 C2H2 ZF 66 88
scaffold451-EXSNAP2012.20 C2H2 ZF 94 116
scaffold451-EXSNAP2012.20 C2H2 ZF 122 144

Links

Other C2H2 ZF family TFs
Other Pristionchus exspectatus TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GTF3A Callithrix jacchus ENSCJAG00000019373 N
ENSDNOG00000037405 Dasypus novemcinctus ENSDNOG00000037405 N
GTF3A Erinaceus europaeus ENSEEUG00000004307 N
GTF3A Felis catus ENSFCAG00000006982 N
GTF3A Otolemur garnettii ENSOGAG00000014589 N