CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SMRZ_0000029401
(
Schistosoma margrebowiei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMRZ_0000029401
T156246_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMRZ_0000029401-mRNA-1
C2H2 ZF
248
269
LRCDQCGKYYRNDYSLHHHICL
SMRZ_0000029401-mRNA-1
C2H2 ZF
291
313
YFCPSCRKPFKWLGNLTRHFYVH
SMRZ_0000029401-mRNA-1
C2H2 ZF
319
341
FRCDICSKEFFSAYQVKRHMNSH
SMRZ_0000029401-mRNA-1
C2H2 ZF
346
368
FKCEVCDKPFTCKYACAWHTRQH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma margrebowiei
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG103842
Fusarium solani
NechaG103842
N
FVEG_02409
Fusarium verticillioides
FVEG_02409
N
estExt_fgenesh1_pm.C_sca_2_chr3_3_00475
Nectria haematococca
estExt_fgenesh1_pm.C_sca_2_chr3_3_00475
N
TRIVIDRAFT_180483
Trichoderma virens
TRIVIDRAFT_180483
N