CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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snap_masked-nMf.1.1.scaf04227-processed-gene-0.3
(
Meloidogyne floridensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
snap_masked-nMf.1.1.scaf04227-processed-gene-0.3
T156469_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
snap_masked-nMf.1.1.scaf04227-processed-gene-0.3-mRNA-1
C2H2 ZF
41
61
YKCDICEKTFSRSNTLITHKL
Links
Other
C2H2 ZF
family TFs
Other
Meloidogyne floridensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF18430
Drosophila ananassae
FBgn0095448
I
GG17396
Drosophila erecta
FBgn0109622
I
GH18237
Drosophila grimshawi
FBgn0125705
I
Rel
Drosophila melanogaster
FBgn0014018
D
GL12490
Drosophila persimilis
FBgn0150096
I
GA11317
Drosophila pseudoobscura
FBgn0071371
I
Rel
Drosophila sechellia
FBgn0069546
I
Rel
Drosophila simulans
FBgn0029245
I
GJ23481
Drosophila virilis
FBgn0210579
I
GK14061
Drosophila willistoni
FBgn0216067
I
Rel
Drosophila yakuba
FBgn0029191
I
LCUP017746
Lucilia cuprina
LCUP017746
I
MDOA004895
Musca domestica
MDOA004895
I