CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GL12490
(
Drosophila persimilis
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
FBgn0150096
T317631_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Rel
M03957_2.00
Drosophila melanogaster
NGGGGRTTCCCCB
VGGGGAAYCCCCN
SELEX
Nitta et al.(2015)
Rel_1
0.766
0.766
Rel
M03958_2.00
Drosophila melanogaster
GGGGGTTCCCCB
VGGGGAACCCCC
SELEX
Nitta et al.(2015)
Rel_2
0.766
0.766
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0176597
Rel
44
229
LRIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVTLCNYDGPAVIRCSLFQTNLESPHSHQLVVRKEAHGCVRSARPARVQGTATYVASVPSTWASYTRPRTYIFEELFKKKRDRLVFEMKRRELSTKEVQKLEKETEDEAKVMNLNQVRLCFEAYKIEDNGNWVPIAHPVFSNAINNR
Links
Other
Rel
family TFs
Other
Drosophila persimilis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GA11317
Drosophila pseudoobscura
FBgn0071371
I
0.844
Rel
Drosophila simulans
FBgn0029245
I
0.772
Rel
Drosophila sechellia
FBgn0069546
I
0.772
Rel
Drosophila melanogaster
FBgn0014018
D
0.766
Rel
Drosophila yakuba
FBgn0029191
I
0.766
GF18430
Drosophila ananassae
FBgn0095448
I
0.766
GG17396
Drosophila erecta
FBgn0109622
I
0.754
GJ23481
Drosophila virilis
FBgn0210579
I
0.737
GH18237
Drosophila grimshawi
FBgn0125705
I
0.725
GI10193
Drosophila mojavensis
FBgn0132959
I
0.725
GK14061
Drosophila willistoni
FBgn0216067
I
0.713