SROB_0001653601 (Schistosoma rodhaini)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SROB_0001653601 T156961_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0001653601-mRNA-1 C2H2 ZF 145 169
SROB_0001653601-mRNA-1 C2H2 ZF 175 199
SROB_0001653601-mRNA-1 C2H2 ZF 291 315
SROB_0001653601-mRNA-1 C2H2 ZF 321 345
SROB_0001653601-mRNA-1 C2H2 ZF 357 381
SROB_0001653601-mRNA-1 C2H2 ZF 387 411
SROB_0001653601-mRNA-1 C2H2 ZF 458 482
SROB_0001653601-mRNA-1 C2H2 ZF 488 509

Links

Other C2H2 ZF family TFs
Other Schistosoma rodhaini TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_32528 Aegilops tauschii F775_32528 N
BRADI4G40450 Brachypodium distachyon BRADI4G40450 N
Cagra.3501s0113 Capsella grandiflora Cagra.3501s0113 N
MLOC_21002 Hordeum vulgare MLOC_21002 N
GSMUA_Achr1G24520_001 Musa acuminata GSMUA_Achr1G24520_001 N
GSMUA_Achr4G00620_001 Musa acuminata GSMUA_Achr4G00620_001 N
GSMUA_Achr6G24610_001 Musa acuminata GSMUA_Achr6G24610_001 N
Pavir.J38487 Panicum virgatum Pavir.J38487 N
Pavir.Ia04672 Panicum virgatum Pavir.Ia04672 N
Si038913m.g Setaria italica Si038913m.g N
Sb01g043100 Sorghum bicolor Sb01g043100 N
Traes_1BS_2D464CB3E Triticum aestivum Traes_1BS_2D464CB3E N
Traes_5AS_C458D04EB Triticum aestivum Traes_5AS_C458D04EB N
Traes_5BS_199E47242 Triticum aestivum Traes_5BS_199E47242 N
Traes_5DS_ED5D9E7C8 Triticum aestivum Traes_5DS_ED5D9E7C8 N
TRIUR3_27708 Triticum urartu TRIUR3_27708 N
GRMZM2G100431 Zea mays GRMZM2G100431 N