CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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augustus_masked-nMf.1.1.scaf19173-processed-gene-0.0
(
Meloidogyne floridensis
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
augustus_masked-nMf.1.1.scaf19173-processed-gene-0.0
T159614_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf19173-processed-gene-0.0-mRNA-1
C2HC ZF
3
19
LRNSRNSHRSLSGCPVA
Links
Other
C2HC ZF
family TFs
Other
Meloidogyne floridensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
YQE_11979
Dendroctonus ponderosae
YQE_11979
N
0.765
GPLIN_000819200
Globodera pallida
GPLIN_000819200
N
0.706
MhA1_Contig653.frz3.gene3
Meloidogyne hapla
MhA1_Contig653.frz3.gene3
N
0.824
Ogr10463
Ophisaurus gracilis
Ogr10463
N
0.706