MDP0000183865 (Malus domestica)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02045 (CBFB_NFYA) IPR001289 MDP0000183865 T160709_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HAP2
M08452_2.00
Saccharomyces cerevisiae
TTGGH

DCCAA
COMPILED
Mathelier et al.(2014)
MA0313.1
0.818 0.818
NFYA
M08104_2.00
Homo sapiens
NSTGATTGGYB

VRCCAATCASN
ChIP-seq
Mathelier et al.(2014)
MA0060.3
0.727 0.727
NFYA
M09018_2.00
Homo sapiens
YKBYSATTGGYYRV

BYRRCCAATSRVMR
Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A
0.727 0.727
Nfya
M09019_2.00
Mus musculus
YKBYSATTGGYYRV

BYRRCCAATSRVMR
Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A
0.727 0.727
NFYA
M10403_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFYA_02
0.727 0.727
NFYA
M10404_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFYA_Q5
0.727 0.727
NFYA
M10405_2.00
Homo sapiens
NYTGATTGGYTAVH

DBTARCCAATCARN
Transfac
Matys et al.(2006)
V$NFY_C
0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000183865 CBF/NF-Y 1 22

Links

Other CBF/NF-Y family TFs
Other Malus domestica TFs

648 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
csin108446 Clonorchis sinensis csin108446 N
T265_03041 Opisthorchis viverrini T265_03041 N
PXEA_0001482701 Protopolystoma xenopodis PXEA_0001482701 N
SCUD_0002117401 Schistosoma curassoni SCUD_0002117401 N
A_06784 Schistosoma haematobium A_06784 N
Sjc_0048660 Schistosoma japonicum Sjc_0048660 N
Smp_068240 Schistosoma mansoni Smp_068240 N
SMTD_0001402601 Schistosoma mattheei SMTD_0001402601 N
TRE_0001278101 Trichobilharzia regenti TRE_0001278101 N