CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-piw_contig_1851-snap-gene-0.3
(
Pythium iwayamai
)
CENPB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04218 (CENP-B_N)
IPR006695
maker-piw_contig_1851-snap-gene-0.3
T162080_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPW00000022790
CENPB
212
255
MDRRSIIHRIDRGEKQAALAKEFGVTRAAISHINKNRVEILTRS
Links
Other
CENPB
family TFs
Other
Pythium iwayamai
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gw1.23.237.1
Phytophthora capsici
gw1.23.237.1
N
0.750
fgenesh_scip_prom.46568.4280
Phytophthora kernoviae
fgenesh_scip_prom.46568.4280
N
0.727
fgenesh_scip_prom.28083.3870
Phytophthora lateralis
fgenesh_scip_prom.28083.3870
N
0.727
F443_02366
Phytophthora parasitica
F443_02366
N
0.705
Phyra75006
Phytophthora ramorum
Phyra75006
N
0.727
Physo143270
Phytophthora sojae
Physo143270
N
0.750
maker-pag1_scaffold_26-snap-gene-0.60
Pythium aphanidermatum
maker-pag1_scaffold_26-snap-gene-0.60
N
0.750
maker-pag1_scaffold_571-snap-gene-0.7
Pythium aphanidermatum
maker-pag1_scaffold_571-snap-gene-0.7
N
0.886
maker-par_contig_4456-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_4456-fgenesh-gene-0.0
N
0.705
maker-par_contig_6341-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_6341-snap-gene-0.1
N
0.841
maker-par_contig_6510-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_6510-snap-gene-0.1
N
0.767
maker-par_contig_926-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_926-fgenesh-gene-0.0
N
0.773
maker-pir_contig_1013-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_1013-fgenesh-gene-0.0
N
0.955
maker-pir_contig_87-fgenesh-gene-0.17
Pythium irregulare
maker-pir_contig_87-fgenesh-gene-0.17
N
0.750
fgenesh-pir_contig_1013-abinit-gene-0.11
Pythium irregulare
fgenesh-pir_contig_1013-abinit-gene-0.11
N
0.955
maker-piw_contig_496-snap-gene-0.3
Pythium iwayamai
maker-piw_contig_496-snap-gene-0.3
N
0.909
maker-piw_contig_165-snap-gene-0.13
Pythium iwayamai
maker-piw_contig_165-snap-gene-0.13
N
0.750
PYU1_G007782
Pythium ultimum
PYU1_G007782
N
0.727
PYU1_G008786
Pythium ultimum
PYU1_G008786
N
0.932
maker-pve_contig_476-snap-gene-0.24
Pythium vexans
maker-pve_contig_476-snap-gene-0.24
N
0.727