Bra022188 (Brassica rapa)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 Bra022188 T163036_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CAMTA5
M06827_2.00 		Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN
NACRCGBNDHNNACRCBN		 Dap-seq
OMalley et al.(2016)
CAMTA5_col_a 		0.860 0.860
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra022188.1-P CG-1 32 146

Links

Other CG-1 family TFs
Other Brassica rapa TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000013858 Ailuropoda melanoleuca ENSAMEG00000013858 I
Alligator_sinensis_CCG007476.1 Alligator sinensis Alligator_sinensis_CCG007476.1 I
ENSAPLG00000003373 Anas platyrhynchos ENSAPLG00000003373 I
ENSAPLG00000015700 Anas platyrhynchos ENSAPLG00000015700 I
GFI1 Anolis carolinensis ENSACAG00000004498 I
Afo_R001655 Aptenodytes forsteri Afo_R001655 I
Afo_R006147 Aptenodytes forsteri Afo_R006147 I
ENSAMXG00000004835 Astyanax mexicanus ENSAMXG00000004835 I
ENSBTAP00000016974-D1 Bos grunniens ENSBTAP00000016974-D1 I
ENSBTAP00000022231-D1 Bos grunniens ENSBTAP00000022231-D1 I
GFI1B Bos taurus ENSBTAG00000012772 I
GFI1 Bos taurus ENSBTAG00000016723 I
e_gw.11.853.1 Branchiostoma floridae e_gw.11.853.1 I
Brh_R002465 Buceros rhinoceros Brh_R002465 I
GFI1 Callithrix jacchus ENSCJAG00000017609 I
GFI1B Callithrix jacchus ENSCJAG00000018071 I
Aan_R000889 Calypte anna Aan_R000889 I
Aan_R008865 Calypte anna Aan_R008865 I
GFI1B Canis familiaris ENSCAFG00000019877 I
GFI1 Canis familiaris ENSCAFG00000020155 I
CapteG45287 Capitella teleta CapteG45287 I
GFI1 Cavia porcellus ENSCPOG00000011727 I
GFI1B Cavia porcellus ENSCPOG00000026928 I
Cmyd_10004881 Chelonia mydas Cmyd_10004881 I
Cmyd_10017172 Chelonia mydas Cmyd_10017172 I
ENSCSAG00000015008 Chlorocebus sabaeus ENSCSAG00000015008 I
CGI_10011355 Crassostrea gigas CGI_10011355 I
CGI_10017941 Crassostrea gigas CGI_10017941 I
gfi1aa Danio rerio ENSDARG00000020746 I
gfi1ab Danio rerio ENSDARG00000044457 I
gfi1b Danio rerio ENSDARG00000079947 I
GFI1 Dasypus novemcinctus ENSDNOG00000000782 I
GFI1B Dasypus novemcinctus ENSDNOG00000036528 I
Gfi1b Dipodomys ordii ENSDORG00000000342 I
GF15430 Drosophila ananassae FBgn0092455 I
GG10437 Drosophila erecta FBgn0102746 I
GH13715 Drosophila grimshawi FBgn0121191 I
sens-2 Drosophila melanogaster FBgn0051632 D
GI23984 Drosophila mojavensis FBgn0146708 I
GL26188 Drosophila persimilis FBgn0163770 I
GA16348 Drosophila pseudoobscura FBgn0076363 I
GM16223 Drosophila sechellia FBgn0171139 I
GJ21268 Drosophila virilis FBgn0208401 I
GK24242 Drosophila willistoni FBgn0226203 I
GE14143 Drosophila yakuba FBgn0231766 I
GFI1 Equus caballus ENSECAG00000006647 I
GFI1B Equus caballus ENSECAG00000008127 I
GFI1 Erinaceus europaeus ENSEEUG00000000198 I
GFI1 Felis catus ENSFCAG00000005914 I
GFI1B Felis catus ENSFCAG00000027147 I
ENSFALG00000001479 Ficedula albicollis ENSFALG00000001479 I
ENSGMOG00000007737 Gadus morhua ENSGMOG00000007737 I
ENSGMOG00000017295 Gadus morhua ENSGMOG00000017295 I
ENSGMOG00000019123 Gadus morhua ENSGMOG00000019123 I
GFI1B Gallus gallus ENSGALG00000003478 I
ENSGALG00000005940 Gallus gallus ENSGALG00000005940 I
gfi1ab Gasterosteus aculeatus ENSGACG00000004257 I
gfi1aa Gasterosteus aculeatus ENSGACG00000015674 I
gfi1b Gasterosteus aculeatus ENSGACG00000018134 I
Gfo_R007994 Geospiza fortis Gfo_R007994 I
Gfo_R010648 Geospiza fortis Gfo_R010648 I
GFI1 Gorilla gorilla ENSGGOG00000005320 I
GFI1B Gorilla gorilla ENSGGOG00000015828 I
GFI1 Homo sapiens ENSG00000162676 D
GFI1B Homo sapiens ENSG00000165702 D
ENSSTOG00000014583 Ictidomys tridecemlineatus ENSSTOG00000014583 I
ENSSTOG00000022285 Ictidomys tridecemlineatus ENSSTOG00000022285 I
ENSLACG00000012207 Latimeria chalumnae ENSLACG00000012207 I
ENSLACG00000013362 Latimeria chalumnae ENSLACG00000013362 I
ENSLOCG00000004711 Lepisosteus oculatus ENSLOCG00000004711 I
ENSLOCG00000005750 Lepisosteus oculatus ENSLOCG00000005750 I
LotgiG129344 Lottia gigantea LotgiG129344 I
LotgiG83709 Lottia gigantea LotgiG83709 I
GFI1 Loxodonta africana ENSLAFG00000018346 I
GFI1B Loxodonta africana ENSLAFG00000022367 I
ENSP00000361195 Macaca fascicularis ENSP00000361195 I
ENSP00000399719 Macaca fascicularis ENSP00000399719 I
ENSMMUG00000005068 Macaca mulatta ENSMMUG00000005068 I
GFI1B Macaca mulatta ENSMMUG00000005948 I
GFI1B Meleagris gallopavo ENSMGAG00000006129 I
GFI1 Meleagris gallopavo ENSMGAG00000008187 I
GFI1 Monodelphis domestica ENSMODG00000011802 I
GFI1B Monodelphis domestica ENSMODG00000012600 I
MDOA011065 Musca domestica MDOA011065 I
ENSMPUG00000004178 Mustela putorius furo ENSMPUG00000004178 I
ENSMPUG00000012489 Mustela putorius furo ENSMPUG00000012489 I
Gfi1b Mus musculus ENSMUSG00000026815 D
Gfi1 Mus musculus ENSMUSG00000029275 D
Myotis_brandtii_GFI1B_10010118 Myotis brandtii Myotis_brandtii_GFI1B_10010118 I
GFI1B Myotis lucifugus ENSMLUG00000006673 I
GFI1 Myotis lucifugus ENSMLUG00000015191 I
NEMVEDRAFT_v1g182742 Nematostella vectensis NEMVEDRAFT_v1g182742 I
ENSNLEG00000010470 Nomascus leucogenys ENSNLEG00000010470 I
ENSNLEG00000012963 Nomascus leucogenys ENSNLEG00000012963 I
GFI1 Ochotona princeps ENSOPRG00000001473 I
Ogr09401 Ophisaurus gracilis Ogr09401 I
ENSONIG00000010573 Oreochromis niloticus ENSONIG00000010573 I
ENSONIG00000013011 Oreochromis niloticus ENSONIG00000013011 I
ENSONIG00000019246 Oreochromis niloticus ENSONIG00000019246 I
GFI1B Ornithorhynchus anatinus ENSOANG00000014723 I
gfi1aa Oryzias latipes ENSORLG00000005060 I
gfi1b Oryzias latipes ENSORLG00000014390 I
GFI1B Otolemur garnettii ENSOGAG00000008879 I
GFI1 Otolemur garnettii ENSOGAG00000027913 I
GFI1B Pan troglodytes ENSPTRG00000021505 I
ENSPANG00000016433 Papio anubis ENSPANG00000016433 I
ENSPANG00000024216 Papio anubis ENSPANG00000024216 I
ENSPSIG00000008734 Pelodiscus sinensis ENSPSIG00000008734 I
ENSPSIG00000012112 Pelodiscus sinensis ENSPSIG00000012112 I
ENSPFOG00000003460 Poecilia formosa ENSPFOG00000003460 I
ENSPFOG00000017327 Poecilia formosa ENSPFOG00000017327 I
ENSPFOG00000023214 Poecilia formosa ENSPFOG00000023214 I
Pvit_00259 Pogona vitticeps Pvit_00259 I
ENSPPYG00000019718 Pongo abelii ENSPPYG00000019718 I
GFI1B Procavia capensis ENSPCAG00000012329 I
GFI1 Pteropus vampyrus ENSPVAG00000006928 I
Gfi1 Rattus norvegicus ENSRNOG00000002042 D
Gfi1b Rattus norvegicus ENSRNOG00000011353 I
Sakowv30015313m.g Saccoglossus kowalevskii Sakowv30015313m.g I
SPU_012645 Strongylocentrotus purpuratus SPU_012645 I
GFI1B Sus scrofa ENSSSCG00000005737 I
GFI1 Sus scrofa ENSSSCG00000006902 I
GFI1 Taeniopygia guttata ENSTGUG00000006060 I
gfi1ab Takifugu rubripes ENSTRUG00000000415 I
gfi1b Takifugu rubripes ENSTRUG00000004525 I
gfi1aa Takifugu rubripes ENSTRUG00000004744 I
tetur16g01570 Tetranychus urticae tetur16g01570 I
gfi1ab Tetraodon nigroviridis ENSTNIG00000000651 I
gfi1b Tetraodon nigroviridis ENSTNIG00000003834 I
GFI1 Tursiops truncatus ENSTTRG00000000082 I
Tal_R001363 Tyto alba Tal_R001363 I
Tal_R006464 Tyto alba Tal_R006464 I
gfi1b.L Xenopus laevis XB-GENE-944429 I
gfi1b Xenopus tropicalis XB-GENE-944426 I
gfi1 Xenopus tropicalis XB-GENE-960553 I
ENSXMAG00000009274 Xiphophorus maculatus ENSXMAG00000009274 I