LIN28A (Myotis lucifugus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSMLUG00000004699 T164625_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LIN28B
M04663_2.00 		Homo sapiens
CGCGRWRDRRCDGCG
CGCHGYYHYWYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_HT-SELEX 		0.714 0.714
LIN28B
M04664_2.00 		Homo sapiens
CGCGRTRNNRCDGCG
CGCHGYNNYAYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_Methyl-HT-SELEX 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000020726 CSD 53 94

Links

Other CSD family TFs
Other Myotis lucifugus TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_05630 Beauveria bassiana BBA_05630 N 0.000
CPUR_03494 Claviceps purpurea CPUR_03494 N 0.000
CFIO01_08239 Colletotrichum fioriniae CFIO01_08239 N 0.000
CGGC5_5177 Colletotrichum gloeosporioides CGGC5_5177 N 0.000
CH063_01997 Colletotrichum higginsianum CH063_01997 N 0.000
CSUB01_01955 Colletotrichum sublineola CSUB01_01955 N 0.000
CCM_04623 Cordyceps militaris CCM_04623 N 0.000
NechaG35170 Fusarium solani NechaG35170 N 0.000
MAC_03499 Metarhizium acridum MAC_03499 N 0.000
MAM_00759 Metarhizium album MAM_00759 N 0.000
MANI_028548 Metarhizium anisopliae MANI_028548 N 0.000
MBR_02516 Metarhizium brunneum MBR_02516 N 0.000
MGU_00497 Metarhizium guizhouense MGU_00497 N 0.000
MAJ_00122 Metarhizium majus MAJ_00122 N 0.000
e_gw1.2.1437.1 Nectria haematococca e_gw1.2.1437.1 N 0.000
OCS_03494 Ophiocordyceps sinensis OCS_03494 N 0.000
S40288_03002 Stachybotrys chartarum S40288_03002 N 0.000
S40285_07596 Stachybotrys chlorohalonata S40285_07596 N 0.000
VHEMI06839 Torrubiella hemipterigena VHEMI06839 N 0.000
TRIATDRAFT_284947 Trichoderma atroviride TRIATDRAFT_284947 N 0.000
TRIREDRAFT_79673 Trichoderma reesei TRIREDRAFT_79673 N 0.000
TRIVIDRAFT_76678 Trichoderma virens TRIVIDRAFT_76678 N 0.000
UV8b_1442 Ustilaginoidea virens UV8b_1442 N 0.000
VDBG_08003 Verticillium albo atrum VDBG_08003 N 0.000
VDBG_08003 Verticillium alfalfae VDBG_08003 N 0.000
VDAG_05574 Verticillium dahliae VDAG_05574 N 0.000