LIN28A (Myotis lucifugus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSMLUG00000004699 T164625_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LIN28B
M04663_2.00 		Homo sapiens
CGCGRWRDRRCDGCG
CGCHGYYHYWYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_HT-SELEX 		0.714 0.714
LIN28B
M04664_2.00 		Homo sapiens
CGCGRTRNNRCDGCG
CGCHGYNNYAYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_Methyl-HT-SELEX 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000020726 CSD 53 94

Links

Other CSD family TFs
Other Myotis lucifugus TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LIN28B Anolis carolinensis ENSACAG00000003957 I 0.714
ENSFALG00000000374 Ficedula albicollis ENSFALG00000000374 I 0.714
ENSGALG00000000388 Gallus gallus ENSGALG00000000388 I 0.714
ENSLACG00000004053 Latimeria chalumnae ENSLACG00000004053 I 0.714
LIN28A Meleagris gallopavo ENSMGAG00000009456 I 0.714
Aan_R005866 Calypte anna Aan_R005866 I 0.714
Cmyd_10009744 Chelonia mydas Cmyd_10009744 I 0.714