YBX2 (Oryctolagus cuniculus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSOCUG00000015064 T164683_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.877 0.877
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.877 0.877
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.877 0.877
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.877 0.877
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000012948 CSD 58 118

Links

Other CSD family TFs
Other Oryctolagus cuniculus TFs

250 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000017952 Astyanax mexicanus ENSAMXG00000017952 I 0.000
MBD3 Cavia porcellus ENSCPOG00000026210 N 0.000
ENSCSAG00000011976 Chlorocebus sabaeus ENSCSAG00000011976 N 0.000
ENSCHOG00000012250 Choloepus hoffmanni ENSCHOG00000012250 N 0.000
MBD3 Gorilla gorilla ENSGGOG00000012396 N 0.000
MBD3 Homo sapiens ENSG00000071655 N 0.000
MBD2 Homo sapiens ENSG00000134046 D 0.000
ENSSTOG00000015870 Ictidomys tridecemlineatus ENSSTOG00000015870 N 0.000
ENSMMUG00000003136 Macaca mulatta ENSMMUG00000003136 I 0.000
MBD3 Macaca mulatta ENSMMUG00000009014 N 0.000
Mbd2 Mus musculus ENSMUSG00000024513 D 0.000
ENSNLEG00000001734 Nomascus leucogenys ENSNLEG00000001734 N 0.000
Ogr00377 Ophisaurus gracilis Ogr00377 N 0.000
MBD3 Oryzias latipes ENSORLG00000004850 N 0.000
MBD3 Otolemur garnettii ENSOGAG00000024563 N 0.000
MBD3 Pan troglodytes ENSPTRG00000010209 N 0.000
ENSPANG00000015324 Papio anubis ENSPANG00000015324 N 0.000
MBD3 Procavia capensis ENSPCAG00000006257 N 0.000
MBD2 Tursiops truncatus ENSTTRG00000009635 N 0.000