CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_10541
(
Coccomyxa subellipsoidea C169
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
estExt_fgenesh1_pg.C_10541
T165434_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
45992
CSD
7
73
ATGTVKWFNSTKGFGFITPDDGGEDLFVHQTSIITDGFRSLAEGEQVEFYVESGDDGRTKAVQVTGP
Links
Other
CSD
family TFs
Other
Coccomyxa subellipsoidea C169
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_304421.1
Arabidopsis lyrata
scaffold_304421.1
N
AT1G11510
Arabidopsis thaliana
AT1G11510
N
Bostr.13671s0316
Boechera stricta
Bostr.13671s0316
N
Cagra.0568s0056
Capsella grandiflora
Cagra.0568s0056
N
Cagra.20132s0006
Capsella grandiflora
Cagra.20132s0006
N