CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J33226
(
Panicum virgatum
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
Pavir.J33226
T165481_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J33226.1.p
CSD
7
73
QRGTVKWFNDTKGFGFISPEDGSEDLFVHQSSIKSEGFRSLAEGEEVEFSVSEGDDGRTKAVDVTGP
Links
Other
CSD
family TFs
Other
Panicum virgatum
TFs
88 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB02G27370
Oryza brachyantha
OB02G27370
N
ORGLA02G0169200
Oryza glaberrima
ORGLA02G0169200
N
OGLUM02G19970
Oryza glumaepatula
OGLUM02G19970
N
BGIOSGA006294
Oryza indica
BGIOSGA006294
N
OLONG_018125
Oryza longistaminata
OLONG_018125
N
ONIVA07G07180
Oryza nivara
ONIVA07G07180
N
OS02G0542200
Oryza sativa
OS02G0542200
N