AMIN007802 (Anopheles minimus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 AMIN007802 T165676_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-28
M03713_2.00 		Drosophila melanogaster
KCGTGTAGGTCGGTGGB
VCCACCGACCTACACGM		 SELEX
Nitta et al.(2015)
lin-28_1 		0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMIN007802-PA CSD 39 104

Links

Other CSD family TFs
Other Anopheles minimus TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_027820 Albugo laibachii ALNC14_027820 N
HpaG806957 Hyaloperonospora arabidopsidis HpaG806957 N
estExt_fgenesh1_kg.C_2620004 Phytophthora capsici estExt_fgenesh1_kg.C_2620004 N
PITG_19177 Phytophthora infestans PITG_19177 N
fgenesh_scip_prom.46568.5520 Phytophthora kernoviae fgenesh_scip_prom.46568.5520 N
fgenesh_scip_prom.28083.3966 Phytophthora lateralis fgenesh_scip_prom.28083.3966 N
F443_04902 Phytophthora parasitica F443_04902 N
Phyra78502 Phytophthora ramorum Phyra78502 N
Physo127993 Phytophthora sojae Physo127993 N
maker-pag1_scaffold_198-snap-gene-0.19 Pythium aphanidermatum maker-pag1_scaffold_198-snap-gene-0.19 N
maker-pir_contig_91-fgenesh-gene-0.1 Pythium irregulare maker-pir_contig_91-fgenesh-gene-0.1 N
maker-piw_contig_312-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_312-fgenesh-gene-0.2 N
PYU1_G011596 Pythium ultimum PYU1_G011596 N
maker-pve_contig_65-fgenesh-gene-0.18 Pythium vexans maker-pve_contig_65-fgenesh-gene-0.18 N
SPRG_08759 Saprolegnia parasitica SPRG_08759 N