RBPJ (Erinaceus europaeus)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSEEUG00000009686 T166052_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		1.000 1.000
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		1.000 1.000
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		1.000 1.000
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		1.000 1.000
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		1.000 1.000
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		1.000 1.000
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		1.000 1.000
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		1.000 1.000
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		1.000 1.000
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		1.000 1.000
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		1.000 1.000
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		1.000 1.000
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		1.000 1.000
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.794 0.794
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.794 0.794
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000008821 CSL 15 145

Links

Other CSL family TFs
Other Erinaceus europaeus TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_07141 Aegilops tauschii F775_07141 I 0.000
Aquca_001_00211 Aquilegia coerulea Aquca_001_00211 I 0.000
Aquca_036_00051 Aquilegia coerulea Aquca_036_00051 I 0.000
anac075 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001013 I 0.000
anac075 Arabidopsis thaliana AT4G29230 D 0.000
Bostr.15697s0168 Boechera stricta Bostr.15697s0168 I 0.000
Bostr.7867s0767 Boechera stricta Bostr.7867s0767 I 0.000
BRADI2G05700 Brachypodium distachyon BRADI2G05700 I 0.000
BRADI2G33307 Brachypodium distachyon BRADI2G33307 I 0.000
Bo1g016630 Brassica oleracea Bo1g016630 I 0.000
Bo7g113660 Brassica oleracea Bo7g113660 I 0.000
Bra011090 Brassica rapa Bra011090 I 0.000
Bra024152 Brassica rapa Bra024152 I 0.000
PK11990.1 Cannabis sativa PK11990.1 D 0.000
PK27085.1 Cannabis sativa PK27085.1 D 0.000
PK28347.1 Cannabis sativa PK28347.1 I 0.000
Cagra.0495s0057 Capsella grandiflora Cagra.0495s0057 I 0.000
Carubv10004602m.g Capsella rubella Carubv10004602m.g I 0.000
evm.TU.supercontig_78.40 Carica papaya evm.TU.supercontig_78.40 I 0.000
evm.TU.supercontig_83.99 Carica papaya evm.TU.supercontig_83.99 I 0.000
Ca_02457 Cicer arietinum Ca_02457 I 0.000
Ca_05913 Cicer arietinum Ca_05913 I 0.000
Ca_11273 Cicer arietinum Ca_11273 I 0.000
Cla011431 Citrullus lanatus Cla011431 I 0.000
Cla017075 Citrullus lanatus Cla017075 I 0.000
Ciclev10010579m.g Citrus clementina Ciclev10010579m.g I 0.000
Ciclev10017822m.g Citrus clementina Ciclev10017822m.g I 0.000
orange1.1g012118m.g Citrus sinensis orange1.1g012118m.g I 0.000
orange1.1g021635m.g Citrus sinensis orange1.1g021635m.g I 0.000
Cucsa.116800 Cucumis sativus Cucsa.116800 I 0.000
Cucsa.288680 Cucumis sativus Cucsa.288680 I 0.000
Eucgr.C00958 Eucalyptus grandis Eucgr.C00958 I 0.000
Eucgr.K01061 Eucalyptus grandis Eucgr.K01061 I 0.000
Thhalv10024980m.g Eutrema salsugineum Thhalv10024980m.g I 0.000
gene11344-v1.0-hybrid Fragaria vesca gene11344-v1.0-hybrid I 0.000
gene27940-v1.0-hybrid Fragaria vesca gene27940-v1.0-hybrid I 0.000
GLYMA01G00880 Glycine max GLYMA01G00880 I 0.000
GLYMA05G36031 Glycine max GLYMA05G36031 I 0.000
GLYMA06G44250 Glycine max GLYMA06G44250 I 0.000
GLYMA07G15180 Glycine max GLYMA07G15180 I 0.000
GLYMA08G03590 Glycine max GLYMA08G03590 I 0.000
GLYMA12G13710 Glycine max GLYMA12G13710 I 0.000
GLYMA12G33460 Glycine max GLYMA12G33460 I 0.000
GLYMA13G30800 Glycine max GLYMA13G30800 I 0.000
GLYMA13G36980 Glycine max GLYMA13G36980 I 0.000
GLYMA15G08480 Glycine max GLYMA15G08480 I 0.000
Gorai.008G155200 Gossypium raimondii Gorai.008G155200 I 0.000
Gorai.009G028900 Gossypium raimondii Gorai.009G028900 I 0.000
Gorai.009G166300 Gossypium raimondii Gorai.009G166300 I 0.000
Gorai.010G078900 Gossypium raimondii Gorai.010G078900 I 0.000
MLOC_75795 Hordeum vulgare MLOC_75795 I 0.000
LPERR01G05530 Leersia perrieri LPERR01G05530 I 0.000
LPERR05G05170 Leersia perrieri LPERR05G05170 I 0.000
Lus10018637.g Linum usitatissimum Lus10018637.g I 0.000
Lus10039873.g Linum usitatissimum Lus10039873.g I 0.000
chr6.LjT04E21.30.nc Lotus japonicus chr6.LjT04E21.30.nc I 0.000
MDP0000124509 Malus domestica MDP0000124509 I 0.000
cassava11584.m1 Manihot esculenta cassava11584.m1 I 0.000
cassava44586.m1 Manihot esculenta cassava44586.m1 I 0.000
cassava46566.m1 Manihot esculenta cassava46566.m1 I 0.000
MTR_2g090735 Medicago truncatula MTR_2g090735 I 0.000
MTR_8g102240 Medicago truncatula MTR_8g102240 I 0.000
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I 0.000
GSMUA_Achr4G30940_001 Musa acuminata GSMUA_Achr4G30940_001 I 0.000
GSMUA_Achr6G05480_001 Musa acuminata GSMUA_Achr6G05480_001 I 0.000
GSMUA_Achr7G09510_001 Musa acuminata GSMUA_Achr7G09510_001 I 0.000
GSMUA_AchrUn_randomG28610_001 Musa acuminata GSMUA_AchrUn_randomG28610_001 I 0.000
OBART01G05840 Oryza barthii OBART01G05840 I 0.000
OBART05G06140 Oryza barthii OBART05G06140 I 0.000
OBART06G18520 Oryza barthii OBART06G18520 I 0.000
OB01G15780 Oryza brachyantha OB01G15780 I 0.000
OB05G15600 Oryza brachyantha OB05G15600 I 0.000
ORGLA01G0055000 Oryza glaberrima ORGLA01G0055000 I 0.000
ORGLA01G0213300 Oryza glaberrima ORGLA01G0213300 I 0.000
ORGLA05G0055000 Oryza glaberrima ORGLA05G0055000 I 0.000
ORGLA06G0153500 Oryza glaberrima ORGLA06G0153500 I 0.000
OGLUM01G06390 Oryza glumaepatula OGLUM01G06390 I 0.000
OGLUM05G06420 Oryza glumaepatula OGLUM05G06420 I 0.000
OGLUM06G19630 Oryza glumaepatula OGLUM06G19630 I 0.000
BGIOSGA002220 Oryza indica BGIOSGA002220 I 0.000
BGIOSGA018654 Oryza indica BGIOSGA018654 I 0.000
BGIOSGA021039 Oryza indica BGIOSGA021039 I 0.000
OLONG_003765 Oryza longistaminata OLONG_003765 N 0.000
OLONG_008708 Oryza longistaminata OLONG_008708 I 0.000
OLONG_021085 Oryza longistaminata OLONG_021085 I 0.000
OMERI01G23720 Oryza meridionalis OMERI01G23720 I 0.000
OMERI06G18870 Oryza meridionalis OMERI06G18870 I 0.000
ONIVA01G06690 Oryza nivara ONIVA01G06690 I 0.000
ONIVA05G06750 Oryza nivara ONIVA05G06750 I 0.000
OPUNC01G05680 Oryza punctata OPUNC01G05680 I 0.000
OPUNC01G25960 Oryza punctata OPUNC01G25960 I 0.000
OPUNC05G05600 Oryza punctata OPUNC05G05600 I 0.000
ORUFI01G06380 Oryza rufipogon ORUFI01G06380 I 0.000
ORUFI01G29010 Oryza rufipogon ORUFI01G29010 I 0.000
ORUFI05G06530 Oryza rufipogon ORUFI05G06530 I 0.000
ORUFI06G19520 Oryza rufipogon ORUFI06G19520 I 0.000
OS01G0191300 Oryza sativa OS01G0191300 I 0.000
OS05G0194500 Oryza sativa OS05G0194500 I 0.000
OS06G0560300 Oryza sativa OS06G0560300 I 0.000
Pavir.Eb00261 Panicum virgatum Pavir.Eb00261 I 0.000
Pavir.J05241 Panicum virgatum Pavir.J05241 I 0.000
Pavir.J13205 Panicum virgatum Pavir.J13205 I 0.000
Pavir.J36494 Panicum virgatum Pavir.J36494 I 0.000
gw1.251.65.1 Physcomitrella patens gw1.251.65.1 I 0.000
POPTR_0006s15740 Populus trichocarpa POPTR_0006s15740 I 0.000
POPTR_0017s04800 Populus trichocarpa POPTR_0017s04800 I 0.000
POPTR_0018s06790 Populus trichocarpa POPTR_0018s06790 I 0.000
Pm027280 Prunus mume Pm027280 I 0.000
PRUPE_ppa004775mg Prunus persica PRUPE_ppa004775mg I 0.000
29912.m005354 Ricinus communis 29912.m005354 I 0.000
29983.m003125 Ricinus communis 29983.m003125 I 0.000
SapurV1A.0212s0190 Salix purpurea SapurV1A.0212s0190 I 0.000
SapurV1A.1259s0030 Salix purpurea SapurV1A.1259s0030 I 0.000
SapurV1A.1828s0030 Salix purpurea SapurV1A.1828s0030 I 0.000
SapurV1A.2554s0030 Salix purpurea SapurV1A.2554s0030 I 0.000
SapurV1A.3101s0030 Salix purpurea SapurV1A.3101s0030 I 0.000
Si001527m.g Setaria italica Si001527m.g I 0.000
Si002301m.g Setaria italica Si002301m.g I 0.000
Solyc05g026180.1 Solanum lycopersicum Solyc05g026180.1 I 0.000
PGSC0003DMG400016896 Solanum tuberosum PGSC0003DMG400016896 I 0.000
Sb03g003170 Sorghum bicolor Sb03g003170 I 0.000
Sb03g030750 Sorghum bicolor Sb03g030750 I 0.000
Sb09g006018 Sorghum bicolor Sb09g006018 I 0.000
TCM_008229 Theobroma cacao TCM_008229 I 0.000
TCM_037747 Theobroma cacao TCM_037747 I 0.000
TRAES3BF097400030CFD_g Triticum aestivum TRAES3BF097400030CFD_g I 0.000
TRIUR3_27393 Triticum urartu TRIUR3_27393 I 0.000
TRIUR3_31341 Triticum urartu TRIUR3_31341 I 0.000
ANAC010 Vitis vinifera VIT_10s0003g00350 I 0.000
VIT_11s0016g02880 Vitis vinifera VIT_11s0016g02880 I 0.000
ANAC073 Vitis vinifera VIT_12s0028g03050 I 0.000
GRMZM2G058518 Zea mays GRMZM2G058518 I 0.000
GRMZM2G112681 Zea mays GRMZM2G112681 I 0.000
GRMZM2G166721 Zea mays GRMZM2G166721 I 0.000