Gorai.009G166300 (Gossypium raimondii)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Gorai.009G166300 T298136_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK11990.1
M01290_2.00 		Cannabis sativa
DNAHDNHDNN
NNHDNHDTNH		 PBM
Lambert et al.(2019)
pTH11336 		0.975 0.852
NAC010
M07167_2.00 		Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN		 Dap-seq
OMalley et al.(2016)
SND3_colamp_a 		0.964 0.852
NAC010
M07168_2.00 		Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND3_col_b 		0.964 0.852
NAC073
M07221_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
SND2_col_a 		0.924 0.748
NAC073
M07222_2.00 		Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND2_colamp_a 		0.924 0.748
anac075
M07223_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
ANAC075_col_a 		0.918 0.783
PK27085.1
M01293_2.00 		Cannabis sativa
AATTTATT
AATAAATT		 PBM
Lambert et al.(2019)
pTH11262 		0.918 0.783
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G166300.1 NAC/NAM 69 208

Links

Other NAC/NAM family TFs
Other Gossypium raimondii TFs

222 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA13G30800 Glycine max GLYMA13G30800 I 0.983
GLYMA15G08480 Glycine max GLYMA15G08480 I 0.983
chr6.LjT04E21.30.nc Lotus japonicus chr6.LjT04E21.30.nc I 0.981
TCM_029798 Theobroma cacao TCM_029798 I 0.978
Pm010104 Prunus mume Pm010104 I 0.978
MDP0000276278 Malus domestica MDP0000276278 I 0.978
MDP0000309351 Malus domestica MDP0000309351 I 0.978
GLYMA07G32250 Glycine max GLYMA07G32250 I 0.977
GLYMA13G24320 Glycine max GLYMA13G24320 I 0.977
PK11990.1 Cannabis sativa PK11990.1 D 0.975
PRUPE_ppa008828mg Prunus persica PRUPE_ppa008828mg I 0.973
Cucsa.126960 Cucumis sativus Cucsa.126960 I 0.973
Bostr.15697s0168 Boechera stricta Bostr.15697s0168 I 0.973
GLYMA12G13710 Glycine max GLYMA12G13710 I 0.972
ANAC010 Vitis vinifera VIT_10s0003g00350 I 0.972
evm.TU.supercontig_2586.1 Carica papaya evm.TU.supercontig_2586.1 I 0.972
MTR_4g088245 Medicago truncatula MTR_4g088245 I 0.971
MTR_8g069160 Medicago truncatula MTR_8g069160 I 0.971
Ca_06348 Cicer arietinum Ca_06348 I 0.971
Ciclev10015976m.g Citrus clementina Ciclev10015976m.g I 0.971
SapurV1A.0012s0710 Salix purpurea SapurV1A.0012s0710 I 0.971
gene29766-v1.0-hybrid Fragaria vesca gene29766-v1.0-hybrid I 0.970
Bo7g047040 Brassica oleracea Bo7g047040 I 0.968
GLYMA06G44250 Glycine max GLYMA06G44250 I 0.967
Ca_11273 Cicer arietinum Ca_11273 I 0.967
Cucsa.046530 Cucumis sativus Cucsa.046530 I 0.967
POPTR_0011s05740 Populus trichocarpa POPTR_0011s05740 I 0.966
Ca_02457 Cicer arietinum Ca_02457 I 0.966
30190.m010767 Ricinus communis 30190.m010767 I 0.966
Gorai.010G157600 Gossypium raimondii Gorai.010G157600 I 0.966
SapurV1A.0032s0620 Salix purpurea SapurV1A.0032s0620 I 0.966
Bra030099 Brassica rapa Bra030099 I 0.965
GLYMA12G33460 Glycine max GLYMA12G33460 I 0.965
GLYMA13G36980 Glycine max GLYMA13G36980 I 0.965
cassava1596.valid.m1 Manihot esculenta cassava1596.valid.m1 I 0.965
NAC010 Arabidopsis thaliana AT1G28470 D 0.964
Bo5g055990 Brassica oleracea Bo5g055990 I 0.964
Bra032910 Brassica rapa Bra032910 I 0.964
PGSC0003DMG400009381 Solanum tuberosum PGSC0003DMG400009381 I 0.964
ANAC010 Arabidopsis lyrata scaffold_103183.1 I 0.964
Solyc07g053590.2 Solanum lycopersicum Solyc07g053590.2 I 0.964
Cagra.1822s0012 Capsella grandiflora Cagra.1822s0012 I 0.964
Carubv10009638m.g Capsella rubella Carubv10009638m.g I 0.964
Thhalv10008249m.g Eutrema salsugineum Thhalv10008249m.g I 0.964
GRMZM2G058518 Zea mays GRMZM2G058518 I 0.963
MTR_2g090735 Medicago truncatula MTR_2g090735 I 0.963
MTR_2g014680 Medicago truncatula MTR_2g014680 I 0.961
MTR_4g078875 Medicago truncatula MTR_4g078875 I 0.959
Lus10015392.g Linum usitatissimum Lus10015392.g I 0.957
Eucgr.D00591 Eucalyptus grandis Eucgr.D00591 I 0.956
Eucgr.D00592 Eucalyptus grandis Eucgr.D00592 I 0.956
Ciclev10017822m.g Citrus clementina Ciclev10017822m.g I 0.955
Lus10013967.g Linum usitatissimum Lus10013967.g I 0.955
orange1.1g021635m.g Citrus sinensis orange1.1g021635m.g I 0.955
Aquca_036_00051 Aquilegia coerulea Aquca_036_00051 I 0.954
cassava46566.m1 Manihot esculenta cassava46566.m1 I 0.953
Cla009808 Citrullus lanatus Cla009808 I 0.951
Eucgr.E03226 Eucalyptus grandis Eucgr.E03226 I 0.951
BGIOSGA021039 Oryza indica BGIOSGA021039 I 0.949
OBART06G18520 Oryza barthii OBART06G18520 I 0.949
OGLUM06G19630 Oryza glumaepatula OGLUM06G19630 I 0.949
OMERI06G18870 Oryza meridionalis OMERI06G18870 I 0.949
ONIVA06G22200 Oryza nivara ONIVA06G22200 I 0.949
ORGLA06G0153500 Oryza glaberrima ORGLA06G0153500 I 0.949
ORUFI06G19520 Oryza rufipogon ORUFI06G19520 I 0.949
OS06G0560300 Oryza sativa OS06G0560300 I 0.949
chr3.CM0160.860.nd Lotus japonicus chr3.CM0160.860.nd I 0.947
MTR_8g102240 Medicago truncatula MTR_8g102240 I 0.944
Ca_05913 Cicer arietinum Ca_05913 I 0.943
POPTR_0004s04900 Populus trichocarpa POPTR_0004s04900 I 0.942
Cla017075 Citrullus lanatus Cla017075 I 0.942
Cucsa.116800 Cucumis sativus Cucsa.116800 I 0.942
Aquca_001_00211 Aquilegia coerulea Aquca_001_00211 I 0.942
Bostr.7867s0691 Boechera stricta Bostr.7867s0691 I 0.941
Ciclev10010579m.g Citrus clementina Ciclev10010579m.g I 0.941
orange1.1g012118m.g Citrus sinensis orange1.1g012118m.g I 0.941
PK28347.1 Cannabis sativa PK28347.1 I 0.941
BRADI2G33307 Brachypodium distachyon BRADI2G33307 I 0.940
Sb03g030750 Sorghum bicolor Sb03g030750 I 0.940
Si002301m.g Setaria italica Si002301m.g I 0.940
TRIUR3_27393 Triticum urartu TRIUR3_27393 I 0.940
Pavir.J05241 Panicum virgatum Pavir.J05241 I 0.940
ORGLA01G0213300 Oryza glaberrima ORGLA01G0213300 I 0.939
TRAES3BF097400030CFD_g Triticum aestivum TRAES3BF097400030CFD_g I 0.939
gw1.251.65.1 Physcomitrella patens gw1.251.65.1 I 0.939
OMERI01G23720 Oryza meridionalis OMERI01G23720 I 0.935
OPUNC01G25960 Oryza punctata OPUNC01G25960 I 0.935
ORUFI01G29010 Oryza rufipogon ORUFI01G29010 I 0.935
OLONG_014922 Oryza longistaminata OLONG_014922 I 0.934
Eucgr.K01061 Eucalyptus grandis Eucgr.K01061 I 0.934
LPERR01G22300 Leersia perrieri LPERR01G22300 I 0.932
Pavir.Eb02718 Panicum virgatum Pavir.Eb02718 I 0.931
Cla019994 Citrullus lanatus Cla019994 I 0.930
Eucgr.D00594 Eucalyptus grandis Eucgr.D00594 I 0.930
Lus10039873.g Linum usitatissimum Lus10039873.g I 0.930
Lus10018637.g Linum usitatissimum Lus10018637.g I 0.929
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I 0.928
Bo1g017410 Brassica oleracea Bo1g017410 I 0.925
Bra011034 Brassica rapa Bra011034 I 0.925
GSMUA_Achr4G30940_001 Musa acuminata GSMUA_Achr4G30940_001 I 0.925
Cagra.1225s0041 Capsella grandiflora Cagra.1225s0041 I 0.925
Carubv10005324m.g Capsella rubella Carubv10005324m.g I 0.925
Thhalv10025819m.g Eutrema salsugineum Thhalv10025819m.g I 0.925
NAC073 Arabidopsis thaliana AT4G28500 D 0.924
Bra024197 Brassica rapa Bra024197 I 0.924
ORUFI05G06530 Oryza rufipogon ORUFI05G06530 I 0.924
BGIOSGA002220 Oryza indica BGIOSGA002220 I 0.922
LPERR01G05530 Leersia perrieri LPERR01G05530 I 0.922
OB01G15780 Oryza brachyantha OB01G15780 I 0.922
OBART01G05840 Oryza barthii OBART01G05840 I 0.922
OGLUM01G06390 Oryza glumaepatula OGLUM01G06390 I 0.922
OLONG_008708 Oryza longistaminata OLONG_008708 I 0.922
ONIVA01G06690 Oryza nivara ONIVA01G06690 I 0.922
OPUNC01G05680 Oryza punctata OPUNC01G05680 I 0.922
ORGLA01G0055000 Oryza glaberrima ORGLA01G0055000 I 0.922
ORUFI01G06380 Oryza rufipogon ORUFI01G06380 I 0.922
OS01G0191300 Oryza sativa OS01G0191300 I 0.922
evm.TU.supercontig_83.99 Carica papaya evm.TU.supercontig_83.99 I 0.922
ANAC073 Arabidopsis lyrata Al_scaffold_0007_1273 I 0.921
Cla011431 Citrullus lanatus Cla011431 I 0.921
Cucsa.288680 Cucumis sativus Cucsa.288680 I 0.921
TCM_008229 Theobroma cacao TCM_008229 I 0.920
29983.m003125 Ricinus communis 29983.m003125 I 0.920
Gorai.008G155200 Gossypium raimondii Gorai.008G155200 I 0.920
GLYMA01G00880 Glycine max GLYMA01G00880 I 0.919
GLYMA08G03590 Glycine max GLYMA08G03590 I 0.919
TCM_037747 Theobroma cacao TCM_037747 I 0.919
VIT_11s0016g02880 Vitis vinifera VIT_11s0016g02880 I 0.919
29912.m005354 Ricinus communis 29912.m005354 I 0.919
cassava11584.m1 Manihot esculenta cassava11584.m1 I 0.919
cassava44586.m1 Manihot esculenta cassava44586.m1 I 0.919
Eucgr.C00958 Eucalyptus grandis Eucgr.C00958 I 0.919
evm.TU.supercontig_78.40 Carica papaya evm.TU.supercontig_78.40 I 0.919
gene11344-v1.0-hybrid Fragaria vesca gene11344-v1.0-hybrid I 0.919
Gorai.009G028900 Gossypium raimondii Gorai.009G028900 I 0.919
MDP0000124509 Malus domestica MDP0000124509 I 0.919
anac075 Arabidopsis thaliana AT4G29230 D 0.918
anac075 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001013 I 0.918
GSMUA_Achr4G02730_001 Musa acuminata GSMUA_Achr4G02730_001 I 0.918
PGSC0003DMG400016896 Solanum tuberosum PGSC0003DMG400016896 I 0.918
POPTR_0006s15740 Populus trichocarpa POPTR_0006s15740 I 0.918
POPTR_0018s06790 Populus trichocarpa POPTR_0018s06790 I 0.918
PRUPE_ppa004775mg Prunus persica PRUPE_ppa004775mg I 0.918
Solyc05g026180.1 Solanum lycopersicum Solyc05g026180.1 I 0.918
Pm027280 Prunus mume Pm027280 I 0.918
Bostr.7867s0767 Boechera stricta Bostr.7867s0767 I 0.918
Cagra.0495s0057 Capsella grandiflora Cagra.0495s0057 I 0.918
Carubv10004602m.g Capsella rubella Carubv10004602m.g I 0.918
SapurV1A.0212s0190 Salix purpurea SapurV1A.0212s0190 I 0.918
PK27085.1 Cannabis sativa PK27085.1 D 0.918
Bo1g016630 Brassica oleracea Bo1g016630 I 0.917
Bra011090 Brassica rapa Bra011090 I 0.917
GSMUA_AchrUn_randomG28610_001 Musa acuminata GSMUA_AchrUn_randomG28610_001 I 0.917
ANAC073 Vitis vinifera VIT_12s0028g03050 I 0.917
Thhalv10024980m.g Eutrema salsugineum Thhalv10024980m.g I 0.917
Bo7g113660 Brassica oleracea Bo7g113660 I 0.916
Bra024152 Brassica rapa Bra024152 I 0.916
SapurV1A.1259s0030 Salix purpurea SapurV1A.1259s0030 I 0.916
F775_16052 Aegilops tauschii F775_16052 I 0.915
GRMZM2G166721 Zea mays GRMZM2G166721 I 0.915
Sb03g003170 Sorghum bicolor Sb03g003170 I 0.915
cassava16121.m1 Manihot esculenta cassava16121.m1 I 0.915
Pavir.Eb00261 Panicum virgatum Pavir.Eb00261 I 0.915
Pavir.J13205 Panicum virgatum Pavir.J13205 I 0.915
BGIOSGA001044 Oryza indica BGIOSGA001044 I 0.914
GLYMA05G36031 Glycine max GLYMA05G36031 I 0.914
GRMZM2G112681 Zea mays GRMZM2G112681 I 0.914
GSMUA_Achr6G05480_001 Musa acuminata GSMUA_Achr6G05480_001 I 0.914
Solyc02g077610.2 Solanum lycopersicum Solyc02g077610.2 I 0.914
PGSC0003DMG400031753 Solanum tuberosum PGSC0003DMG400031753 I 0.913
Si001527m.g Setaria italica Si001527m.g I 0.912
BGIOSGA020356 Oryza indica BGIOSGA020356 I 0.911
OB05G33280 Oryza brachyantha OB05G33280 I 0.911
OBART05G25770 Oryza barthii OBART05G25770 I 0.911
OGLUM05G27400 Oryza glumaepatula OGLUM05G27400 I 0.911
ONIVA05G27670 Oryza nivara ONIVA05G27670 I 0.911
OPUNC05G23360 Oryza punctata OPUNC05G23360 I 0.911
ORGLA05G0222500 Oryza glaberrima ORGLA05G0222500 I 0.911
ORUFI05G27670 Oryza rufipogon ORUFI05G27670 I 0.911
OS05G0563000 Oryza sativa OS05G0563000 I 0.911
POPTR_0017s04800 Populus trichocarpa POPTR_0017s04800 I 0.911
BRADI2G46197 Brachypodium distachyon BRADI2G46197 I 0.910
GSMUA_Achr6G27000_001 Musa acuminata GSMUA_Achr6G27000_001 I 0.910
LPERR05G21400 Leersia perrieri LPERR05G21400 I 0.910
OPUNC05G05600 Oryza punctata OPUNC05G05600 I 0.910
PK25812.1 Cannabis sativa PK25812.1 I 0.910
OGLUM01G29870 Oryza glumaepatula OGLUM01G29870 I 0.909
ONIVA01G29490 Oryza nivara ONIVA01G29490 I 0.909
SapurV1A.1828s0030 Salix purpurea SapurV1A.1828s0030 I 0.909
SapurV1A.2554s0030 Salix purpurea SapurV1A.2554s0030 I 0.909
SapurV1A.3101s0030 Salix purpurea SapurV1A.3101s0030 I 0.909
GSMUA_Achr7G09510_001 Musa acuminata GSMUA_Achr7G09510_001 I 0.908
Eucgr.D00595 Eucalyptus grandis Eucgr.D00595 I 0.906
Gorai.010G078900 Gossypium raimondii Gorai.010G078900 I 0.906
Aquca_051_00040 Aquilegia coerulea Aquca_051_00040 I 0.905
GLYMA07G15180 Glycine max GLYMA07G15180 I 0.903
BRADI2G05700 Brachypodium distachyon BRADI2G05700 I 0.902
MLOC_75795 Hordeum vulgare MLOC_75795 I 0.902
Bo7g113170 Brassica oleracea Bo7g113170 I 0.900
OBART05G06140 Oryza barthii OBART05G06140 I 0.900
cassava17166.m1 Manihot esculenta cassava17166.m1 I 0.900
OLONG_018487 Oryza longistaminata OLONG_018487 I 0.897
OMERI02G35510 Oryza meridionalis OMERI02G35510 I 0.897
AMTR_s00021p00209320 Amborella trichopoda AMTR_s00021p00209320 I 0.892
OLONG_021085 Oryza longistaminata OLONG_021085 I 0.891
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I 0.891
OB05G15600 Oryza brachyantha OB05G15600 I 0.890
Pavir.Ga02265 Panicum virgatum Pavir.Ga02265 I 0.888
LPERR05G05170 Leersia perrieri LPERR05G05170 I 0.884
Pavir.Ga02302 Panicum virgatum Pavir.Ga02302 I 0.882
TCM_011869 Theobroma cacao TCM_011869 I 0.881
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I 0.880
F775_07141 Aegilops tauschii F775_07141 I 0.879
GLYMA02G11140 Glycine max GLYMA02G11140 I 0.879
TRIUR3_31341 Triticum urartu TRIUR3_31341 I 0.879
GLYMA01G22510 Glycine max GLYMA01G22510 I 0.878
Pavir.Ab02919 Panicum virgatum Pavir.Ab02919 I 0.878
Gorai.008G186300 Gossypium raimondii Gorai.008G186300 I 0.876
Aquca_002_01098 Aquilegia coerulea Aquca_002_01098 I 0.875
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I 0.873
SOG1 Vitis vinifera VIT_01s0011g02990 I 0.873
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I 0.872