CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPPYG00000019874
(
Pongo abelii
)
CSL
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09271 (LAG1-DNAbind)
IPR015351
ENSPPYG00000019874
T166115_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RBPJ
M00735_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig2
0.856
0.856
RBPJ
M00736_2.00
Homo sapiens
NNNYTCHCAN
NTGDGARNNN
PBM
DelBianco et al.(2010)
GST-CSL_Fig4
0.856
0.856
RBPJ
M00737_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1
0.856
0.856
RBPJ
M00738_2.00
Homo sapiens
NBTCHCAN
NTGDGAVN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1
0.856
0.856
RBPJ
M00739_2.00
Homo sapiens
NNBTCHCAN
NTGDGAVNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His
0.856
0.856
RBPJ
M00740_2.00
Homo sapiens
NNNYTCYCAN
NTGRGARNNN
PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2
0.856
0.856
RBPJ
M00741_2.00
Homo sapiens
NNNBTCHCAN
NTGDGAVNNN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2
0.856
0.856
RBPJ
M00742_2.00
Homo sapiens
NDYTCHCAB
VTGDGARHN
PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5
0.856
0.856
RBPJ
M08105_2.00
Homo sapiens
NNTTCCCABN
NVTGGGAANN
ChIP-seq
Mathelier et al.(2014)
MA1116.1
0.856
0.856
RBPJ
M09020_2.00
Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV
Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A
0.856
0.856
Rbpj
M09021_2.00
Mus musculus
NBTTCCCASVV
BBSTGGGAAVN
Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A
0.856
0.856
RBPJ
M10413_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_01
0.856
0.856
RBPJ
M10414_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RBPJK_Q4
0.856
0.856
Su(H)
M10415_2.00
Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB
Transfac
Matys et al.(2006)
I$SUH_01
0.720
0.720
Su(H)
M08455_2.00
Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD
COMPILED
Mathelier et al.(2014)
MA0085.1
0.720
0.720
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000022269
CSL
4
128
VLILHAKVVQKSYGNEKSSFCPPACVYLMGSGWKKIKQMKCDGCSEESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLCISDSDKQKHFMLSVKMFYGNGDDIGVFLSKSSKPSKKKQSLKNAD
Links
Other
CSL
family TFs
Other
Pongo abelii
TFs
100 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_08211
Ancylostoma caninum
ANCCAN_08211
I
0.000
ACAC_0000449001
Angiostrongylus cantonensis
ACAC_0000449001
I
0.000
ACOC_0001074701
Angiostrongylus costaricensis
ACOC_0001074701
I
0.000
ALUE_0000980501
Ascaris lumbricoides
ALUE_0000980501
I
0.000
ASU_07400
Ascaris suum
ASU_07400
I
0.000
Bm7610
Brugia malayi
Bm7610
N
0.000
Bm3734
Brugia malayi
Bm3734
I
0.000
BXY_0327500
Bursaphelenchus xylophilus
BXY_0327500
I
0.000
CBG00123
Caenorhabditis briggsae
CBG00123
I
0.000
odr-7
Caenorhabditis elegans
WBGene00003854
D
0.000
CRE14738
Caenorhabditis remanei
CRE14738
I
0.000
DICVIV_10361
Dictyocaulus viviparus
DICVIV_10361
I
0.000
nDi.2.2.2.g08322
Dirofilaria immitis
nDi.2.2.2.g08322
I
0.000
GPLIN_000471400
Globodera pallida
GPLIN_000471400
N
0.000
HPLM_0000729201
Haemonchus placei
HPLM_0000729201
I
0.000
HPBE_0000822201
Heligmosomoides bakeri
HPBE_0000822201
I
0.000
Minc11758
Meloidogyne incognita
Minc11758
N
0.000
Minc08762
Meloidogyne incognita
Minc08762
N
0.000
OESDEN_00181
Oesophagostomum dentatum
OESDEN_00181
I
0.000
nOo.2.0.1.g08993
Onchocerca ochengi
nOo.2.0.1.g08993
I
0.000
WBGene00238790
Onchocerca volvulus
WBGene00238790
I
0.000
L596_g18571
Steinernema carpocapsae
L596_g18571
I
0.000
L893_g9511
Steinernema glaseri
L893_g9511
I
0.000
L898_g1167
Steinernema monticolum
L898_g1167
I
0.000
L892_g8133
Steinernema scapterisci
L892_g8133
I
0.000
SPAL_0001051900
Strongyloides papillosus
SPAL_0001051900
I
0.000
SSTP_0000225800
Strongyloides stercoralis
SSTP_0000225800
I
0.000
SVE_1772700
Strongyloides venezuelensis
SVE_1772700
I
0.000
SMUV_0000837101
Syphacia muris
SMUV_0000837101
I
0.000
TCLT_0001044101
Thelazia callipaeda
TCLT_0001044101
I
0.000