SMUV_0000837101 (Syphacia muris)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMUV_0000837101 T310426_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
odr-7
M00697_2.00 		Caenorhabditis elegans
NDWTTGTAGNN
NNCTACAAWHN		 PBM
Narasimhan et al.(2015)
pTH9323 		0.800 0.600
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000837101-mRNA-1 Nuclear receptor 258 332

Links

Other Nuclear receptor family TFs
Other Syphacia muris TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HPLM_0000729201 Haemonchus placei HPLM_0000729201 I 0.862
HPBE_0000822201 Heligmosomoides bakeri HPBE_0000822201 I 0.848
SVE_1772700 Strongyloides venezuelensis SVE_1772700 I 0.848
BXY_0327500 Bursaphelenchus xylophilus BXY_0327500 I 0.846
scaffold532-EXSNAP2012.4 Pristionchus exspectatus scaffold532-EXSNAP2012.4 I 0.826
SPAL_0001051900 Strongyloides papillosus SPAL_0001051900 I 0.825
SSTP_0000225800 Strongyloides stercoralis SSTP_0000225800 I 0.825
GPLIN_000471400 Globodera pallida GPLIN_000471400 N 0.823
L893_g9511 Steinernema glaseri L893_g9511 I 0.822
L596_g18571 Steinernema carpocapsae L596_g18571 I 0.822
L892_g8133 Steinernema scapterisci L892_g8133 I 0.822
OESDEN_00181 Oesophagostomum dentatum OESDEN_00181 I 0.817
L898_g1167 Steinernema monticolum L898_g1167 I 0.816
EVEC_0000673301 Enterobius vermicularis EVEC_0000673301 N 0.814
ANCCAN_08211 Ancylostoma caninum ANCCAN_08211 I 0.808
Minc11758 Meloidogyne incognita Minc11758 N 0.806
Minc08762 Meloidogyne incognita Minc08762 N 0.806
DICVIV_10361 Dictyocaulus viviparus DICVIV_10361 I 0.802
ACAC_0000449001 Angiostrongylus cantonensis ACAC_0000449001 I 0.802
ACOC_0001074701 Angiostrongylus costaricensis ACOC_0001074701 I 0.802
CRE14738 Caenorhabditis remanei CRE14738 I 0.800
odr-7 Caenorhabditis elegans WBGene00003854 D 0.800
CBG00123 Caenorhabditis briggsae CBG00123 I 0.797
Bm3734 Brugia malayi Bm3734 I 0.782
ASU_07400 Ascaris suum ASU_07400 I 0.774
ALUE_0000980501 Ascaris lumbricoides ALUE_0000980501 I 0.774
LOAG_12992 Loa loa LOAG_12992 I 0.770
nDi.2.2.2.g08322 Dirofilaria immitis nDi.2.2.2.g08322 I 0.765
PTRK_0001669000 Parastrongyloides trichosuri PTRK_0001669000 N 0.762
nOo.2.0.1.g08993 Onchocerca ochengi nOo.2.0.1.g08993 I 0.758
WBGene00238790 Onchocerca volvulus WBGene00238790 I 0.758