CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LOAG_12992
(
Loa loa
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
LOAG_12992
T305695_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
odr-7
M00697_2.00
Caenorhabditis elegans
NDWTTGTAGNN
NNCTACAAWHN
PBM
Narasimhan et al.(2015)
pTH9323
0.870
0.743
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFO15518.2
Nuclear receptor
162
236
ELCQVCLSAASNGLHFGAKTCAACAAFFRRTVSDEKSYTCKRSQRCDIKLNCATGYRKICRSCRMKRCLHIGMLP
Links
Other
Nuclear receptor
family TFs
Other
Loa loa
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm3734
Brugia malayi
Bm3734
I
0.972
nDi.2.2.2.g08322
Dirofilaria immitis
nDi.2.2.2.g08322
I
0.972
WBGene00238790
Onchocerca volvulus
WBGene00238790
I
0.969
ALUE_0000980501
Ascaris lumbricoides
ALUE_0000980501
I
0.969
ASU_07400
Ascaris suum
ASU_07400
I
0.969
nOo.2.0.1.g08993
Onchocerca ochengi
nOo.2.0.1.g08993
I
0.969
TCLT_0001044101
Thelazia callipaeda
TCLT_0001044101
I
0.960
Bm7610
Brugia malayi
Bm7610
N
0.924
GPLIN_000471400
Globodera pallida
GPLIN_000471400
N
0.912
HPBE_0000822201
Heligmosomoides bakeri
HPBE_0000822201
I
0.898
HPLM_0000729201
Haemonchus placei
HPLM_0000729201
I
0.892
Minc08762
Meloidogyne incognita
Minc08762
N
0.891
Minc11758
Meloidogyne incognita
Minc11758
N
0.891
OESDEN_00181
Oesophagostomum dentatum
OESDEN_00181
I
0.889
BXY_0327500
Bursaphelenchus xylophilus
BXY_0327500
I
0.886
ACAC_0000449001
Angiostrongylus cantonensis
ACAC_0000449001
I
0.876
ACOC_0001074701
Angiostrongylus costaricensis
ACOC_0001074701
I
0.876
DICVIV_10361
Dictyocaulus viviparus
DICVIV_10361
I
0.876
CRE14738
Caenorhabditis remanei
CRE14738
I
0.870
odr-7
Caenorhabditis elegans
WBGene00003854
D
0.870
ANCCAN_08211
Ancylostoma caninum
ANCCAN_08211
I
0.862
L596_g18571
Steinernema carpocapsae
L596_g18571
I
0.860
L892_g8133
Steinernema scapterisci
L892_g8133
I
0.860
L893_g9511
Steinernema glaseri
L893_g9511
I
0.860
CBG00123
Caenorhabditis briggsae
CBG00123
I
0.857
L898_g1167
Steinernema monticolum
L898_g1167
I
0.855
SVE_1772700
Strongyloides venezuelensis
SVE_1772700
I
0.811
SPAL_0001051900
Strongyloides papillosus
SPAL_0001051900
I
0.785
SSTP_0000225800
Strongyloides stercoralis
SSTP_0000225800
I
0.785
SMUV_0000837101
Syphacia muris
SMUV_0000837101
I
0.770