CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CRE20139
(
Caenorhabditis remanei
)
CUT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02376 (CUT)
IPR003350
CRE20139
T166558_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE20139
CUT
172
250
DSVYLDTKDIARQIKEWFTLGICTQAFFAVHVLGTVRNRLHRVLTIPRPFNSLKTGKELFIKMYNWLKLSEDVKKEILS
CRE20139
CUT
317
394
VNYVNTKRISVVVKNWLERTQATQEWFATKILKRCRRTLNQCLNNPKDWKDLSQKREIYVKMHNWMCLTEEQRHEMMR
Links
Other
CUT
family TFs
Other
Caenorhabditis remanei
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
chr2.LjT01H08.70.nc
Lotus japonicus
chr2.LjT01H08.70.nc
N
GSMUA_Achr7G12440_001
Musa acuminata
GSMUA_Achr7G12440_001
N
OBART06G09580
Oryza barthii
OBART06G09580
N
ORGLA06G0090600
Oryza glaberrima
ORGLA06G0090600
N
OGLUM06G10380
Oryza glumaepatula
OGLUM06G10380
N
ONIVA06G11110
Oryza nivara
ONIVA06G11110
N
OPUNC06G09140
Oryza punctata
OPUNC06G09140
N
ORUFI06G09920
Oryza rufipogon
ORUFI06G09920
N
GRMZM2G307823
Zea mays
GRMZM2G307823
N
GRMZM2G409627
Zea mays
GRMZM2G409627
N