CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KDM2A
(
Monodelphis domestica
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSMODG00000007767
T168096_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.936
0.936
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.809
0.809
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.787
0.787
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.787
0.787
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.745
0.745
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000009649
CxxC
562
608
GARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQC
Links
Other
CxxC
family TFs
Other
Monodelphis domestica
TFs
203 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000006857
Ailuropoda melanoleuca
ENSAMEG00000006857
N
0.000
Alligator_sinensis_CCG020716.1
Alligator sinensis
Alligator_sinensis_CCG020716.1
N
0.000
ENSAPLG00000016290
Anas platyrhynchos
ENSAPLG00000016290
N
0.000
Afo_R009710
Aptenodytes forsteri
Afo_R009710
N
0.000
ENSAMXG00000005528
Astyanax mexicanus
ENSAMXG00000005528
N
0.000
Brh_R013486
Buceros rhinoceros
Brh_R013486
N
0.000
L3MBTL4
Callithrix jacchus
ENSCJAG00000015716
N
0.000
L3MBTL4
Canis familiaris
ENSCAFG00000018588
N
0.000
ENSCSAG00000017582
Chlorocebus sabaeus
ENSCSAG00000017582
N
0.000
L3MBTL4
Choloepus hoffmanni
ENSCHOG00000003637
N
0.000
l3mbtl1b
Danio rerio
ENSDARG00000074346
N
0.000
L3MBTL4
Dasypus novemcinctus
ENSDNOG00000006559
N
0.000
L3mbtl4
Dipodomys ordii
ENSDORG00000013048
N
0.000
L3MBTL4
Felis catus
ENSFCAG00000031842
N
0.000
ENSFALG00000001349
Ficedula albicollis
ENSFALG00000001349
N
0.000
ENSGMOG00000015112
Gadus morhua
ENSGMOG00000015112
N
0.000
ENSGALG00000001345
Gallus gallus
ENSGALG00000001345
N
0.000
l3mbtl1b
Gasterosteus aculeatus
ENSGACG00000009206
N
0.000
Gfo_R008942
Geospiza fortis
Gfo_R008942
N
0.000
L3MBTL4
Gorilla gorilla
ENSGGOG00000015056
N
0.000
L3MBTL4
Homo sapiens
ENSG00000154655
N
0.000
ENSLACG00000008848
Latimeria chalumnae
ENSLACG00000008848
N
0.000
ENSLACG00000022431
Latimeria chalumnae
ENSLACG00000022431
N
0.000
ENSLOCG00000004175
Lepisosteus oculatus
ENSLOCG00000004175
N
0.000
ENSLOCG00000004154
Lepisosteus oculatus
ENSLOCG00000004154
N
0.000
ENSP00000382976
Macaca fascicularis
ENSP00000382976
N
0.000
L3MBTL4
Macaca mulatta
ENSMMUG00000016302
N
0.000
ENSMEUG00000009268
Macropus eugenii
ENSMEUG00000009268
N
0.000
ENSMGAG00000002349
Meleagris gallopavo
ENSMGAG00000002349
N
0.000
L3MBTL4
Microcebus murinus
ENSMICG00000015626
N
0.000
ENSMPUG00000004964
Mustela putorius furo
ENSMPUG00000004964
N
0.000
L3mbtl4
Mus musculus
ENSMUSG00000041565
N
0.000
Myotis_brandtii_L3MBTL4_10019905
Myotis brandtii
Myotis_brandtii_L3MBTL4_10019905
N
0.000
L3MBTL4
Myotis lucifugus
ENSMLUG00000002011
N
0.000
NEMVEDRAFT_v1g20650
Nematostella vectensis
NEMVEDRAFT_v1g20650
N
0.000
NEMVEDRAFT_v1g187589
Nematostella vectensis
NEMVEDRAFT_v1g187589
N
0.000
ENSNLEG00000006925
Nomascus leucogenys
ENSNLEG00000006925
N
0.000
Ogr03652
Ophisaurus gracilis
Ogr03652
N
0.000
ENSONIG00000006099
Oreochromis niloticus
ENSONIG00000006099
N
0.000
L3MBTL4
Oryctolagus cuniculus
ENSOCUG00000013013
N
0.000
l3mbtl1b
Oryzias latipes
ENSORLG00000009102
N
0.000
L3MBTL4
Otolemur garnettii
ENSOGAG00000006203
N
0.000
L3MBTL4
Pan troglodytes
ENSPTRG00000009845
N
0.000
ENSPANG00000008894
Papio anubis
ENSPANG00000008894
N
0.000
ENSPSIG00000008427
Pelodiscus sinensis
ENSPSIG00000008427
N
0.000
ENSPFOG00000016946
Poecilia formosa
ENSPFOG00000016946
N
0.000
Pvit_13740
Pogona vitticeps
Pvit_13740
N
0.000
ENSPPYG00000009022
Pongo abelii
ENSPPYG00000009022
N
0.000
L3MBTL4
Pteropus vampyrus
ENSPVAG00000002970
N
0.000
L3mbtl4
Rattus norvegicus
ENSRNOG00000025273
N
0.000
L3MBTL4
Sorex araneus
ENSSARG00000006794
N
0.000
ENSTGUG00000000758
Taeniopygia guttata
ENSTGUG00000000758
N
0.000
l3mbtl1b
Takifugu rubripes
ENSTRUG00000008264
N
0.000
l3mbtl1b
Tetraodon nigroviridis
ENSTNIG00000018364
N
0.000
L3MBTL4
Tursiops truncatus
ENSTTRG00000012966
N
0.000
Tal_R003526
Tyto alba
Tal_R003526
N
0.000
l3mbtl3.S
Xenopus laevis
XB-GENE-1219139
N
0.000
l3mbtl3
Xenopus tropicalis
XB-GENE-1219135
N
0.000
ENSXMAG00000013080
Xiphophorus maculatus
ENSXMAG00000013080
N
0.000