CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI00493000
(
Haemonchus contortus
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
HCOI00493000
T169815_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dmd-9
M00661_2.00
Caenorhabditis elegans
ACCTTT
AAAGGT
PBM
Narasimhan et al.(2015)
pTH8999
0.908
0.733
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI00493000.t1
DM
25
69
KRLTCRKCEGHGFISVLKGHAAVCPFNECSCERCSSVMSMRANAL
Links
Other
DM
family TFs
Other
Haemonchus contortus
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_12400
Ancylostoma caninum
ANCCAN_12400
I
0.946
ACAC_0000297301
Angiostrongylus cantonensis
ACAC_0000297301
I
0.925
CBG03381
Caenorhabditis briggsae
CBG03381
I
0.916
dmd-9
Caenorhabditis elegans
WBGene00022060
D
0.908
CJA18545
Caenorhabditis japonica
CJA18545
I
0.894
CRE30013
Caenorhabditis remanei
CRE30013
I
0.910
CRE30014
Caenorhabditis remanei
CRE30014
I
0.910
CGOC_0001138001
Cylicostephanus goldi
CGOC_0001138001
I
0.946
HPLM_0000698001
Haemonchus placei
HPLM_0000698001
I
0.946
HPBE_0000455001
Heligmosomoides bakeri
HPBE_0000455001
I
0.946
Hba_03543
Heterorhabditis bacteriophora
Hba_03543
I
0.943
NECAME_02595
Necator americanus
NECAME_02595
I
0.946
NBR_0000615901
Nippostrongylus brasiliensis
NBR_0000615901
I
0.946
SVUK_0000682301
Strongylus vulgaris
SVUK_0000682301
I
0.943