CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_56869
(
Hordeum vulgare
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
MLOC_56869
T179708_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_56869.1
FAR1
94
185
TFYIAYAGRVGFSVRIARSRKSKCSESIIMLRFVCSKEGFSKEKRVVAGKKTRKRLASIREGCNAMLEVLRRGDNKWVATKLVKEHNHEVGM
MLOC_56869.1
FAR1
216
303
TFYYSYAIRAGFEVRVRQSRKSQDESLKMLKLVCSKHRYHSGRENNGEDTKRDPSRDGCNALFEIIRKDKSVWRVSKLILEHTHELNP
MLOC_56869.2
FAR1
94
185
TFYIAYAGRVGFSVRIARSRKSKCSESIIMLRFVCSKEGFSKEKRVVAGKKTRKRLASIREGCNAMLEVLRRGDNKWVATKLVKEHNHEVGM
MLOC_56869.2
FAR1
216
303
TFYYSYAIRAGFEVRVRQSRKSQDESLKMLKLVCSKHRYHSGRENNGEDTKRDPSRDGCNALFEIIRKDKSVWRVSKLILEHTHELNP
MLOC_56869.3
FAR1
94
185
TFYIAYAGRVGFSVRIARSRKSKCSESIIMLRFVCSKEGFSKEKRVVAGKKTRKRLASIREGCNAMLEVLRRGDNKWVATKLVKEHNHEVGM
MLOC_56869.3
FAR1
216
303
TFYYSYAIRAGFEVRVRQSRKSQDESLKMLKLVCSKHRYHSGRENNGEDTKRDPSRDGCNALFEIIRKDKSVWRVSKLILEHTHELNP
Links
Other
FAR1
family TFs
Other
Hordeum vulgare
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB08G14200
Oryza brachyantha
OB08G14200
N
0.872
BGIOSGA028053
Oryza indica
BGIOSGA028053
N
0.866
Pavir.Fa01859
Panicum virgatum
Pavir.Fa01859
N
0.888
Pavir.Fb00442
Panicum virgatum
Pavir.Fb00442
N
0.871
PDK_20s1556451g004
Phoenix dactylifera
PDK_20s1556451g004
N
0.772
Si015801m.g
Setaria italica
Si015801m.g
N
0.882
Sb07g004380
Sorghum bicolor
Sb07g004380
N
0.882
Traes_5AL_0DF34352F
Triticum aestivum
Traes_5AL_0DF34352F
N
0.978
Traes_5BL_CCDB985ED
Triticum aestivum
Traes_5BL_CCDB985ED
N
0.972
Traes_5DL_4ABC24378
Triticum aestivum
Traes_5DL_4ABC24378
N
0.978
GRMZM2G302323
Zea mays
GRMZM2G302323
N
0.871