Pavir.Fa01859 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.Fa01859 T181731_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa01859.1.p FAR1 84 175
Pavir.Fa01859.1.p FAR1 207 298
Pavir.Fa01859.2.p FAR1 84 175
Pavir.Fa01859.2.p FAR1 207 298
Pavir.Fa01859.3.p FAR1 84 175
Pavir.Fa01859.3.p FAR1 207 298
Pavir.Fa01859.4.p FAR1 84 175
Pavir.Fa01859.4.p FAR1 207 298
Pavir.Fa01859.5.p FAR1 84 175
Pavir.Fa01859.5.p FAR1 207 298

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Fb00442 Panicum virgatum Pavir.Fb00442 N 0.972
Sb07g004380 Sorghum bicolor Sb07g004380 N 0.966
Si015801m.g Setaria italica Si015801m.g N 0.966
GRMZM2G302323 Zea mays GRMZM2G302323 N 0.955
BGIOSGA028053 Oryza indica BGIOSGA028053 N 0.905
OB08G14200 Oryza brachyantha OB08G14200 N 0.899
MLOC_56869 Hordeum vulgare MLOC_56869 N 0.888
Traes_5AL_0DF34352F Triticum aestivum Traes_5AL_0DF34352F N 0.888
Traes_5BL_CCDB985ED Triticum aestivum Traes_5BL_CCDB985ED N 0.888
Traes_5DL_4ABC24378 Triticum aestivum Traes_5DL_4ABC24378 N 0.888
PDK_20s1556451g004 Phoenix dactylifera PDK_20s1556451g004 N 0.794