POPTR_0006s02150 (Populus trichocarpa)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03101 (FAR1) IPR004330 POPTR_0006s02150 T180082_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FHY3
M08114_2.00 		Arabidopsis thaliana
NHCACGCGCTNN
NNAGCGCGTGDN		 ChIP-seq
Mathelier et al.(2014)
MA0557.1 		0.900 0.900
FHY3
M09540_2.00 		Arabidopsis thaliana
NHSACGCGCBNN
NNVGCGCGTSDN		 Misc
Heinz et al.(2010)
Arabidopsis-FHY3_GSE30711 		0.900 0.900
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s02150.1 FAR1 87 189

Links

Other FAR1 family TFs
Other Populus trichocarpa TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_192991 Agaricus bisporus AGABI2DRAFT_192991 N
M378DRAFT_55133 Amanita muscaria M378DRAFT_55133 N
M437DRAFT_42083 Aureobasidium melanogenum M437DRAFT_42083 I
M438DRAFT_316511 Aureobasidium pullulans M438DRAFT_316511 I
AUEXF2481DRAFT_43803 Aureobasidium subglaciale AUEXF2481DRAFT_43803 I
BAUCODRAFT_25460 Baudoinia compniacensis BAUCODRAFT_25460 I
BOTBODRAFT_121202 Botryobasidium botryosum BOTBODRAFT_121202 I
A1O1_05243 Capronia coronata A1O1_05243 I
A1O3_09529 Capronia epimyces A1O3_09529 I
PV04_07501 Capronia semiimmersa PV04_07501 I
CERSUDRAFT_112805 Ceriporiopsis subvermispora CERSUDRAFT_112805 N
CHGG_01378 Chaetomium globosum CHGG_01378 N
Z519_11638 Cladophialophora bantiana Z519_11638 I
G647_03030 Cladophialophora carrionii G647_03030 I
PV07_11277 Cladophialophora immunda PV07_11277 I
A1O5_02336 Cladophialophora psammophila A1O5_02336 I
A1O7_07076 Cladophialophora yegresii A1O7_07076 I
DACRYDRAFT_49314 Dacryopinax sp DACRYDRAFT_49314 N
DOTSEDRAFT_71657 Dothistroma septosporum DOTSEDRAFT_71657 I
A1O9_04901 Exophiala aquamarina A1O9_04901 I
HMPREF1120_02025 Exophiala dermatitidis HMPREF1120_02025 I
PV10_07771 Exophiala mesophila PV10_07771 I
PV06_00786 Exophiala oligosperma PV06_00786 I
PV11_00659 Exophiala sideris PV11_00659 I
PV08_00691 Exophiala spinifera PV08_00691 I
PV05_05426 Exophiala xenobiotica PV05_05426 I
FIBRA_04735 Fibroporia radiculosa FIBRA_04735 N
Z517_02667 Fonsecaea pedrosoi Z517_02667 I
GALMADRAFT_923040 Galerina marginata GALMADRAFT_923040 N
GALMADRAFT_91917 Galerina marginata GALMADRAFT_91917 N
GALMADRAFT_75179 Galerina marginata GALMADRAFT_75179 N
GALMADRAFT_143289 Galerina marginata GALMADRAFT_143289 N
GALMADRAFT_1298303 Galerina marginata GALMADRAFT_1298303 N
M7I_1656 Glarea lozoyensis M7I_1656 I
GLOTRDRAFT_133387 Gloeophyllum trabeum GLOTRDRAFT_133387 N
GYMLUDRAFT_115352 Gymnopus luxurians GYMLUDRAFT_115352 N
HETIRDRAFT_459848 Heterobasidion irregulare HETIRDRAFT_459848 N
MEF2A Homo sapiens ENSG00000068305 D
JAAARDRAFT_645626 Jaapia argillacea JAAARDRAFT_645626 N
JAAARDRAFT_30535 Jaapia argillacea JAAARDRAFT_30535 N
K443DRAFT_100748 Laccaria amethystina K443DRAFT_100748 I
K443DRAFT_361864 Laccaria amethystina K443DRAFT_361864 N
LACBIDRAFT_293207 Laccaria bicolor LACBIDRAFT_293207 N
MELLADRAFT_32043 Melampsora laricipopulina MELLADRAFT_32043 N
MVLG_02620 Microbotryum violaceum MVLG_02620 N
MPER_07979 Moniliophthora perniciosa MPER_07979 N
Moror_4352 Moniliophthora roreri Moror_4352 N
MYCTH_2295245 Myceliophthora thermophila MYCTH_2295245 N
estExt_fgenesh1_pm.C_110082 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_110082 I
PABG_01574 Paracoccidioides brasiliensis PABG_01574 I
PAAG_00645 Paracoccidioides sp lutzii PAAG_00645 I
PHACADRAFT_58963 Phanerochaete carnosa PHACADRAFT_58963 N
fgenesh1_pg.C_scaffold_3000539 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000539 N
PHLGIDRAFT_36660 Phlebiopsis gigantea PHLGIDRAFT_36660 N
PILCRDRAFT_603306 Piloderma croceum PILCRDRAFT_603306 N
PILCRDRAFT_571433 Piloderma croceum PILCRDRAFT_571433 N
PIIN_03660 Piriformospora indica PIIN_03660 N
PISMIDRAFT_680570 Pisolithus microcarpus PISMIDRAFT_680570 N
M404DRAFT_388312 Pisolithus tinctorius M404DRAFT_388312 N
PLEOSDRAFT_1033113 Pleurotus ostreatus PLEOSDRAFT_1033113 N
POSPLDRAFT_104793 Postia placenta POSPLDRAFT_104793 N
MYCFIDRAFT_72135 Pseudocercospora fijiensis MYCFIDRAFT_72135 I
Z518_09438 Rhinocladiella mackenziei Z518_09438 I
V565_186740 Rhizoctonia solani V565_186740 I
SCHCODRAFT_258818 Schizophyllum commune SCHCODRAFT_258818 N
SCHCODRAFT_81364 Schizophyllum commune SCHCODRAFT_81364 N
SCLCIDRAFT_969057 Scleroderma citrinum SCLCIDRAFT_969057 N
M408DRAFT_288510 Serendipita vermifera M408DRAFT_288510 N
SERLA73DRAFT_185178 Serpula lacrymans SERLA73DRAFT_185178 N
M422DRAFT_782754 Sphaerobolus stellatus M422DRAFT_782754 N
CY34DRAFT_134098 Suillus luteus CY34DRAFT_134098 N
TSTA_004010 Talaromyces stipitatus TSTA_004010 I
BN946_scf184783.g11 Trametes cinnabarina BN946_scf184783.g11 N
M407DRAFT_240766 Tulasnella calospora M407DRAFT_240766 N