CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0007s01870
(
Populus trichocarpa
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
POPTR_0007s01870
T180086_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0007s01870.1
FAR1
98
186
AFYNAYATRIGFVIRVSKLSRSRRDGSAIGRALVCNKEGFRMPDKREKIVRQRAETRVGCRAMILVRKISSGKWVVTKFVKEHTHTLTP
Links
Other
FAR1
family TFs
Other
Populus trichocarpa
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_500562.1
Arabidopsis lyrata
scaffold_500562.1
I
LBD23
Arabidopsis thaliana
AT3G26620
D
LBD24
Arabidopsis thaliana
AT3G26660
I
Bostr.0556s0333
Boechera stricta
Bostr.0556s0333
I
Bo00285s360
Brassica oleracea
Bo00285s360
I
Bo3g065910
Brassica oleracea
Bo3g065910
I
Bo7g083780
Brassica oleracea
Bo7g083780
I
Cagra.3598s0013
Capsella grandiflora
Cagra.3598s0013
I
Carubv10018979m.g
Capsella rubella
Carubv10018979m.g
I
evm.TU.supercontig_1.335
Carica papaya
evm.TU.supercontig_1.335
I
Thhalv10005497m.g
Eutrema salsugineum
Thhalv10005497m.g
I
Thhalv10015971m.g
Eutrema salsugineum
Thhalv10015971m.g
I