CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc01g112320.2
(
Solanum lycopersicum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
Solyc01g112320.2
T180452_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc01g112320.2.1
FAR1
73
165
AFYNSYARRVGFSTRVSSSRRSRKDGAIIQRSFVCAKEGFRNLNEKRTKDREIKRPRTVTRVGCKAALSVKIQDSGMWVVSNFVKEHNHELVP
Links
Other
FAR1
family TFs
Other
Solanum lycopersicum
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATBZIP61
Arabidopsis lyrata
fgenesh2_kg.5__2254__AT3G58120.1
N
ATBZIP34
Arabidopsis lyrata
fgenesh2_kg.4__2390__AT2G42380.2
N
BZIP61
Arabidopsis thaliana
AT3G58120
N
BZIP34
Arabidopsis thaliana
AT2G42380
N
Bostr.20903s0063
Boechera stricta
Bostr.20903s0063
N
Bostr.18722s0001
Boechera stricta
Bostr.18722s0001
N
Bo6g074510
Brassica oleracea
Bo6g074510
N
Bo4g015960
Brassica oleracea
Bo4g015960
N
Bo8g092430
Brassica oleracea
Bo8g092430
N
Bra000256
Brassica rapa
Bra000256
N
Bra003320
Brassica rapa
Bra003320
N
Bra004689
Brassica rapa
Bra004689
N
Bra007380
Brassica rapa
Bra007380
N
PK21227.1
Cannabis sativa
PK21227.1
N
Cagra.2636s0024
Capsella grandiflora
Cagra.2636s0024
N
Cagra.0686s0029
Capsella grandiflora
Cagra.0686s0029
N
Carubv10023644m.g
Capsella rubella
Carubv10023644m.g
N
Carubv10017617m.g
Capsella rubella
Carubv10017617m.g
N
evm.TU.supercontig_209.8
Carica papaya
evm.TU.supercontig_209.8
N
Ca_11292
Cicer arietinum
Ca_11292
N
Ca_02472
Cicer arietinum
Ca_02472
N
Cla015875
Citrullus lanatus
Cla015875
N
Ciclev10015966m.g
Citrus clementina
Ciclev10015966m.g
N
Cucsa.148840
Cucumis sativus
Cucsa.148840
N
Eucgr.K01085
Eucalyptus grandis
Eucgr.K01085
N
Thhalv10016923m.g
Eutrema salsugineum
Thhalv10016923m.g
N
Thhalv10006090m.g
Eutrema salsugineum
Thhalv10006090m.g
N
gene17796-v1.0-hybrid
Fragaria vesca
gene17796-v1.0-hybrid
N
GLYMA06G43760
Glycine max
GLYMA06G43760
N
GLYMA12G14130
Glycine max
GLYMA12G14130
N
GLYMA12G33600
Glycine max
GLYMA12G33600
N
GLYMA13G36870
Glycine max
GLYMA13G36870
N
Lus10033630.g
Linum usitatissimum
Lus10033630.g
N
Lus10017656.g
Linum usitatissimum
Lus10017656.g
N
Lus10002185.g
Linum usitatissimum
Lus10002185.g
N
chr3.CM0160.1080.nc
Lotus japonicus
chr3.CM0160.1080.nc
N
cassava15850.m1
Manihot esculenta
cassava15850.m1
N
MTR_2g090900
Medicago truncatula
MTR_2g090900
N
MTR_4g079500
Medicago truncatula
MTR_4g079500
N
POPTR_0013s12810
Populus trichocarpa
POPTR_0013s12810
N
Pm014253
Prunus mume
Pm014253
N
PRUPE_ppa016271mg
Prunus persica
PRUPE_ppa016271mg
N
29646.m001108
Ricinus communis
29646.m001108
N
SapurV1A.0474s0270
Salix purpurea
SapurV1A.0474s0270
N
SapurV1A.0500s0200
Salix purpurea
SapurV1A.0500s0200
N
SapurV1A.1977s0020
Salix purpurea
SapurV1A.1977s0020
N
Solyc12g010800.1
Solanum lycopersicum
Solyc12g010800.1
N
Solyc07g053450.2
Solanum lycopersicum
Solyc07g053450.2
N
PGSC0003DMG400009388
Solanum tuberosum
PGSC0003DMG400009388
N
PGSC0003DMG401007810
Solanum tuberosum
PGSC0003DMG401007810
N
TCM_003607
Theobroma cacao
TCM_003607
N
VIT_12s0028g02590
Vitis vinifera
VIT_12s0028g02590
N