CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc09g075640.2
(
Solanum lycopersicum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
Solyc09g075640.2
T180474_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc09g075640.2.1
FAR1
59
153
EFYCSFGKQCGFSIRRHRTRGKDGVGRGITRRDFTCHRGGYPQLKPSDDGKLQRNRKSSRCGCQAFMRIVKRADHNVPEWRITGFSNVHNHELLK
Links
Other
FAR1
family TFs
Other
Solanum lycopersicum
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_025_00175
Aquilegia coerulea
Aquca_025_00175
N
0.911
BRADI5G11330
Brachypodium distachyon
BRADI5G11330
N
0.722
PK12746.1
Cannabis sativa
PK12746.1
N
0.933
evm.TU.supercontig_151.57
Carica papaya
evm.TU.supercontig_151.57
N
0.967
Ciclev10004395m.g
Citrus clementina
Ciclev10004395m.g
N
0.900
orange1.1g004420m.g
Citrus sinensis
orange1.1g004420m.g
N
0.900
Eucgr.K03522
Eucalyptus grandis
Eucgr.K03522
N
0.944
gene05172-v1.0-hybrid
Fragaria vesca
gene05172-v1.0-hybrid
N
0.889
GLYMA09G04394
Glycine max
GLYMA09G04394
N
0.900
GLYMA15G15450
Glycine max
GLYMA15G15450
N
0.889
Gorai.011G195800
Gossypium raimondii
Gorai.011G195800
N
0.867
MLOC_15705
Hordeum vulgare
MLOC_15705
N
0.700
MDP0000786741
Malus domestica
MDP0000786741
N
0.911
MDP0000233216
Malus domestica
MDP0000233216
N
0.911
cassava28226.m1
Manihot esculenta
cassava28226.m1
N
0.922
PDK_20s1722071g001
Phoenix dactylifera
PDK_20s1722071g001
N
0.889
PDK_20s1635961g004
Phoenix dactylifera
PDK_20s1635961g004
N
0.911
POPTR_0002s20030
Populus trichocarpa
POPTR_0002s20030
N
0.933
POPTR_0004s23620
Populus trichocarpa
POPTR_0004s23620
N
0.700
POPTR_0008s10810
Populus trichocarpa
POPTR_0008s10810
N
0.878
Pm008290
Prunus mume
Pm008290
N
0.911
Pm003854
Prunus mume
Pm003854
N
0.700
PRUPE_ppa002003mg
Prunus persica
PRUPE_ppa002003mg
N
0.911
PRUPE_ppa002379mg
Prunus persica
PRUPE_ppa002379mg
N
0.700
29685.m000503
Ricinus communis
29685.m000503
N
0.700
29889.m003255
Ricinus communis
29889.m003255
N
0.889
SapurV1A.0158s0480
Salix purpurea
SapurV1A.0158s0480
N
0.944
SapurV1A.0225s0240
Salix purpurea
SapurV1A.0225s0240
N
0.700
TCM_041141
Theobroma cacao
TCM_041141
N
0.700
TCM_021310
Theobroma cacao
TCM_021310
N
0.900
Traes_2AL_9A4A7514E
Triticum aestivum
Traes_2AL_9A4A7514E
N
0.700
Traes_2BL_C1DE13045
Triticum aestivum
Traes_2BL_C1DE13045
N
0.700
TRIUR3_11057
Triticum urartu
TRIUR3_11057
N
0.700
VIT_05s0077g01400
Vitis vinifera
VIT_05s0077g01400
N
0.933
VIT_07s0005g01120
Vitis vinifera
VIT_07s0005g01120
N
0.967